RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
ABR-208ENST00000570688 KCNJ3P48549 501 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 SERPINB10P48595 397 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 UBE2E1P51965 193 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 LOXL3P58215 753 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 TIMM50Q3ZCQ8 353 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 IDNKQ5T6J7 187 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 HEPN1Q6WQI6 88 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 GPR141Q7Z602 305 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 CLVS1Q8IUQ0 354 aaPredicted RBP9.05□□□□□ -0.96
ABR-208ENST00000570688 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 LEAP2Q969E1 77 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 SLC25A46Q96AG3 418 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
ABR-208ENST00000570688 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 ZMAT3Q9HA38 289 aaKnown RBP9.05□□□□□ -0.96
ABR-208ENST00000570688 PCDHB16Q9NRJ7 776 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 HSF4Q9ULV5 492 aa9.05□□□□□ -0.96
ABR-208ENST00000570688 IGKV1D-8A0A087WSZ0 117 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 A0A087X0M5 115 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 TRGV10A0A0A0MS01 117 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 IGHV2-26A0A0B4J1V2 119 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 A0A1B0GX30 115 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 ZNF729A6NN14 1252 aaPredicted RBP9.04□□□□□ -0.96
ABR-208ENST00000570688 MCRIP1C9JLW8 97 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 IGLV1-47P01700 117 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 GLAP06280 429 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 PTHLHP12272 177 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 GNB3P16520 340 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 CD34P28906 385 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 GPR157Q5UAW9 335 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 ZNF626Q68DY1 528 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 TRAPPC6BQ86SZ2 158 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 CMTM4Q8IZR5 234 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 DTX3Q8N9I9 347 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 OR11H6Q8NGC7 330 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 OR4P4Q8NGL7 312 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 OR10R2Q8NGX6 335 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 PTX4Q96A99 478 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 DUX5Q96PT3 197 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 PARP12Q9H0J9 701 aaKnown RBP9.04□□□□□ -0.96
ABR-208ENST00000570688 DCSTAMPQ9H295 470 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
ABR-208ENST00000570688 TRBV6-6A0A0A6YYG2 114 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 IGKV1-6A0A0C4DH72 117 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 SLC31A2O15432 143 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 SSX5O60225 188 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 HILS1P60008 231 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 DIAPH2-AS1Q14236 149 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 GNMTQ14749 295 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 HMGN3Q15651 99 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 LTC4SQ16873 150 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 ZNF260Q3ZCT1 412 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 ZNF439Q8NDP4 499 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 NEK7Q8TDX7 302 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 NEDD4LQ96PU5 975 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 URM1Q9BTM9 101 aaKnown RBP9.03□□□□□ -0.96
ABR-208ENST00000570688 MS4A7Q9GZW8 240 aaPredicted RBP9.03□□□□□ -0.96
ABR-208ENST00000570688 SPACA1Q9HBV2 294 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 RHBDL2Q9NX52 303 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 IDI2-AS1Q9NZ38 188 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 OR6C3Q9NZP0 311 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 SPATA2Q9UM82 520 aa9.03□□□□□ -0.96
ABR-208ENST00000570688 A0A1W2PPE3 182 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 FUOMA2VDF0 154 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 DNAJC9-AS1A6NH13 148 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 H3BMQ9 156 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 LY6LH3BQJ8 138 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 F2RL2O00254 374 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 ORC5O43913 435 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 HBZP02008 142 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
ABR-208ENST00000570688 MELTFP08582 738 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 HIST1H1DP16402 221 aaKnown RBP9.02□□□□□ -0.97
ABR-208ENST00000570688 ZNF134P52741 427 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 RBM39Q14498 530 aaKnown RBP9.02□□□□□ -0.97
ABR-208ENST00000570688 HERPUD1Q15011 391 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 FOXB2Q5VYV0 432 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 Q6YL49 198 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 Q6ZTK2 550 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 IZUMO1Q8IYV9 350 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 OR56B1Q8NGI3 324 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 DYNC2LI1Q8TCX1 351 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 MAFIPQ8WZ33 124 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 ARL11Q969Q4 196 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 ISOC1Q96CN7 298 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 MDFIQ99750 246 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 ATG5Q9H1Y0 275 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 MIXL1Q9H2W2 232 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 TAF9BQ9HBM6 251 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.02□□□□□ -0.97
ABR-208ENST00000570688 PLEKHJ1Q9NW61 149 aa9.02□□□□□ -0.97
ABR-208ENST00000570688 PSG11Q9UQ72 335 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms