RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 COL10A1Q03692 680 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 FOXL1Q12952 345 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 KLRD1Q13241 179 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 ZNF146Q15072 292 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 ZNF79Q15937 498 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 TAF9Q16594 264 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 PIGYQ3MUY2 71 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 MOGAT2Q3SYC2 334 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 SPIN3Q5JUX0 258 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 NCR3LG1Q68D85 454 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
COMMD4-225ENST00000569245 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 PRDM13Q9H4Q3 707 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 SEBOXQ9HB31 216 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-225ENST00000569245 C19orf12Q9NSK7 152 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 TRAV18A0A075B6X5 111 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 RNASEK-C17orf49H0YIS7 233 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 NPFFO15130 113 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 CTDSPLO15194 276 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 SOCS1O15524 211 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 HLA-DQB1P01920 261 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 CRYBA1P05813 215 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 MELTFP08582 738 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 PPP5CP53041 499 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 IL18Q14116 193 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 SIGIRRQ6IA17 410 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 IZUMO1Q8IYV9 350 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 DTX3Q8N9I9 347 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 OR5D13Q8NGL4 314 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 SSMEM1Q8WWF3 244 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 SRRQ9GZT4 340 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 FAM234AQ9H0X4 552 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 GLS2Q9UI32 602 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
COMMD4-225ENST00000569245 hCG_1809904A0A1W2PP81 198 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PPE2 198 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PR64 198 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PRV1 198 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 MEIOCA2RUB1 952 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 K7N7A8 449 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 GSTP1P09211 210 aaKnown RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 GABRR1P24046 479 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 DUSP1P28562 367 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 BLVRBP30043 206 aaPredicted RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 SNU13P55769 128 aaKnown RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 EDDM3BP56851 147 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 MRPS10P82664 201 aaKnown RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 ZNF260Q3ZCT1 412 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 PLAC9Q5JTB6 97 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 Q6ZTK2 550 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 GDPD3Q7L5L3 318 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 PNKDQ8N490 385 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 GDPD1Q8N9F7 314 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 TAF15Q92804 592 aaKnown RBP eCLIP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 RAB3CQ96E17 227 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 ABHD1Q96SE0 405 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 AUNIPQ9H7T9 357 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 SPACA1Q9HBV2 294 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 RCC2Q9P258 522 aaKnown RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 IL36RNQ9UBH0 155 aa11.84□□□□□ -0.51
COMMD4-225ENST00000569245 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
COMMD4-225ENST00000569245 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 MFNGO00587 321 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 PDCD6O75340 191 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 CA11O75493 328 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 OR7C1O76099 320 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-225ENST00000569245 HAND1O96004 215 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 IGHV4-59P01825 116 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 GLAP06280 429 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 FBP1P09467 338 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 HIST1H1DP16402 221 aaKnown RBP11.83□□□□□ -0.52
COMMD4-225ENST00000569245 FUT3P21217 361 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 CHATP28329 748 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 UBE2E1P51965 193 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 CDNFQ49AH0 187 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 Q6P435 159 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 CHST4Q8NCG5 386 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 TNFRSF14Q92956 283 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 ARHGAP5-AS1Q96IT6 56 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 NEDD4LQ96PU5 975 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 SDHCQ99643 169 aaPredicted RBP11.83□□□□□ -0.52
COMMD4-225ENST00000569245 CHIAQ9BZP6 476 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
COMMD4-225ENST00000569245 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 SERPINE3A8MV23 424 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 SH2D1BO14796 132 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 DEGS1O15121 323 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 GSTZ1O43708 216 aaPredicted RBP11.82□□□□□ -0.52
COMMD4-225ENST00000569245 CCL3L1P16619 93 aa11.82□□□□□ -0.52
COMMD4-225ENST00000569245 OMGP23515 440 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms