RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
SMAD3-208ENST00000558827 MMP28Q9H239 520 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 PEX16Q9Y5Y5 336 aa10.01□□□□□ -0.81
SMAD3-208ENST00000558827 NPIPB11E5RHQ5 1161 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 MT-ND4P03905 459 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 SNRNP70P08621 437 aaKnown RBP10□□□□□ -0.81
SMAD3-208ENST00000558827 HSMCR30P0CW71 290 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 FSTP19883 344 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 CEACAM3P40198 252 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 HES1Q14469 280 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 RAB12Q6IQ22 244 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 C10orf99Q6UWK7 81 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 CEACAM19Q7Z692 300 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 Q8N2B8 174 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 OR10V1Q8NGI7 309 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 OR56B4Q8NH76 319 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 CFHR4Q92496 578 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 CCDC90BQ9GZT6 254 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 SCN3BQ9NY72 215 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 ETAA1Q9NY74 926 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 TGP01266 2768 aa10□□□□□ -0.81
SMAD3-208ENST00000558827 A0A087X0M5 115 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 A0A1B0GX30 115 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MCRIP1C9JLW8 97 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 AIPO00170 330 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 SDCBPO00560 298 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 SLC31A2O15432 143 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 ZNF780AO75290 641 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MPIG6BO95866 241 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MGMTP16455 207 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MNDAP41218 407 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MAP2K4P45985 399 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 KCNJ3P48549 501 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 SPHARQ15513 63 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MPV17LQ2QL34 196 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 NKAPLQ5M9Q1 402 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 RBM48Q5RL73 367 aaKnown RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 SYT6Q5T7P8 510 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 LIPKQ5VXJ0 399 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MOB3BQ86TA1 216 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 OR5AU1Q8NGC0 362 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 OR10X1Q8NGY0 326 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 OR1L1Q8NH94 360 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MYDGFQ969H8 173 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 MND1Q9BWT6 205 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 PCDHB16Q9NRJ7 776 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 TRAPPC2LQ9UL33 140 aa9.99□□□□□ -0.81
SMAD3-208ENST00000558827 LSM2Q9Y333 95 aaKnown RBP9.99□□□□□ -0.81
SMAD3-208ENST00000558827 G3V4G9 280 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 H0YHG0 523 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 H3BUI4 141 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 AMY1AP04745 511 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 AMY2AP04746 511 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-208ENST00000558827 ARHGDIBP52566 201 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 MADCAM1Q13477 382 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 GPR176Q14439 515 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 SIGIRRQ6IA17 410 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 C11orf88Q6PI97 169 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 UNQ9370/PRO34162Q6UXP9 181 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 ZNF497Q6ZNH5 498 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 LYPD6Q86Y78 171 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 RBM14Q96PK6 669 aaKnown RBP9.98□□□□□ -0.81
SMAD3-208ENST00000558827 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 IFT22Q9H7X7 185 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 LINC00527Q9UJ94 153 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 AMMECR1Q9Y4X0 333 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-208ENST00000558827 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
SMAD3-208ENST00000558827 A0A1W2PPI3 338 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 C12orf77C9JDV5 145 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 OR2F2O95006 317 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 IGKV1D-33P01593 117 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 IGKV1-33P01594 117 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 TMEM11P17152 192 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 GZMHP20718 246 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 RPS25P62851 125 aaKnown RBP9.97□□□□□ -0.81
SMAD3-208ENST00000558827 GPR50Q13585 617 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 IRF3Q14653 427 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 P2RY14Q15391 338 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 PDLIM3Q53GG5 364 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-208ENST00000558827 CCDC144NLQ6NUI1 221 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 LINC00596Q86U02 117 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 LRRTM1Q86UE6 522 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 CNBD2Q96M20 576 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 LINC00574Q9H8X3 128 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 LIN7BQ9HAP6 207 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 GFOD1Q9NXC2 390 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 TPRKBQ9Y3C4 175 aa9.97□□□□□ -0.81
SMAD3-208ENST00000558827 ADARB2-AS1A8MUL3 147 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 ZNF736B4DX44 427 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-208ENST00000558827 CCRL2O00421 344 aa9.96□□□□□ -0.82
SMAD3-208ENST00000558827 RGS10O43665 173 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms