RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 ZNF485Q8NCK3 441 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 BPIFB6Q8NFQ5 453 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 ARL11Q969Q4 196 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 IFT22Q9H7X7 185 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 LINC00574Q9H8X3 128 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 PCDHB16Q9NRJ7 776 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.69□□□□□ -0.22
GPHN-211ENST00000556020 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 HSPE1-MOB4S4R3N1 261 aa13.69□□□□□ -0.22
GPHN-211ENST00000556020 IGHV3-43A0A0B4J1X8 118 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 A0A1W2PPI3 338 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 IGHV3-43DP0DP04 118 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 TMEM11P17152 192 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 CELP19835 753 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 REG1BP48304 166 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 TAS2R43P59537 309 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 CD83Q01151 205 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 AWAT2Q6E213 333 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 LAIR2Q6ISS4 152 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
GPHN-211ENST00000556020 TRBV5-7A0A0A0MS05 114 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 ANKRD65E5RJM6 399 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 M0QZK8 103 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 AIPO00170 330 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 SDCBPO00560 298 aaPredicted RBP13.67□□□□□ -0.22
GPHN-211ENST00000556020 GPX5O75715 221 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 FSTP19883 344 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 GZMHP20718 246 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 RAB7AP51149 207 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 DOC2BQ14184 412 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 GPR176Q14439 515 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 OGFRL1Q5TC84 451 aaPredicted RBP13.67□□□□□ -0.22
GPHN-211ENST00000556020 FAM53AQ6NSI3 398 aaPredicted RBP13.67□□□□□ -0.22
GPHN-211ENST00000556020 MOB3BQ86TA1 216 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 OR4X2Q8NGF9 303 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 SGCDQ92629 289 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 MYDGFQ969H8 173 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 BANF2Q9H503 90 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 CNOT2Q9NZN8 540 aaKnown RBP13.67□□□□□ -0.22
GPHN-211ENST00000556020 PSORS1C1Q9UIG5 152 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
GPHN-211ENST00000556020 IGHV3-72A0A0B4J1Y9 119 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A18PA6NE21 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A16PA6NEW6 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A20PA6NIJ5 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A9PA6NNJ1 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A12PA8MX19 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A5PA8MXJ8 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 MCRIP1C9JLW8 97 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 HSD17B6O14756 317 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 IGKV1D-33P01593 117 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 IGKV1-33P01594 117 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A15PP0C7V4 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A13PP0C7W8 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A14PP0C7W9 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 FAM90A24PP0C7X0 464 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 CD33P20138 364 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 WNT4P56705 351 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 KPRPQ5T749 579 aaPredicted RBP13.66□□□□□ -0.22
GPHN-211ENST00000556020 THNSL2Q86YJ6 484 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 DERL3Q96Q80 235 aa13.66□□□□□ -0.22
GPHN-211ENST00000556020 TSSC4Q9Y5U2 329 aaPredicted RBP13.66□□□□□ -0.22
GPHN-211ENST00000556020 C15orf65H3BRN8 121 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 CCRL2O00421 344 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 PIN1P1O15428 100 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 CRTAPO75718 401 aaPredicted RBP13.65□□□□□ -0.22
GPHN-211ENST00000556020 PF4P02776 101 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 MT-ND4P03905 459 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 VHLP40337 213 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 RAB12Q6IQ22 244 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 ZNF497Q6ZNH5 498 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 SLC16A12Q6ZSM3 486 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 OR8H3Q8N146 312 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 PRR18Q8N4B5 295 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 OR4K15Q8NH41 348 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 SELENOIQ9C0D9 397 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 ETAA1Q9NY74 926 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
GPHN-211ENST00000556020 IGHV1-3A0A0C4DH29 117 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 PSMB11A5LHX3 300 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 CASQ2O14958 399 aaPredicted RBP13.64□□□□□ -0.23
GPHN-211ENST00000556020 ORC5O43913 435 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 GAPDHP04406 335 aaKnown RBP13.64□□□□□ -0.23
GPHN-211ENST00000556020 IGLL1P15814 213 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 MGMTP16455 207 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 SYT6Q5T7P8 510 aaPredicted RBP13.64□□□□□ -0.23
GPHN-211ENST00000556020 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 NANOGP1Q8N7R0 232 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 C5orf56Q8N8D9 126 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 OR10V1Q8NGI7 309 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 FAM46BQ96A09 425 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 CYYR1Q96J86 154 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
GPHN-211ENST00000556020 VCXQ9H320 206 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 PLCXD1Q9NUJ7 323 aa13.64□□□□□ -0.23
GPHN-211ENST00000556020 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms