RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TUSC1Q2TAM9 212 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 EIF2S3LQ2VIR3 472 aaKnown RBP9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 LHX4Q969G2 390 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 SCNM1Q9BWG6 230 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 BIN3Q9NQY0 253 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 ONECUT1Q9UBC0 465 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 RFNGQ9Y644 331 aa9.27□□□□□ -0.92
TGFBR1-209ENST00000552516 LRRC3CA6NJW4 275 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 PPIHO43447 177 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 KITLGP21583 273 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 GLIPR1P48060 266 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 DYNLT3P51808 116 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 RBM11P57052 281 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 MOB3BQ86TA1 216 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 ABHD17AQ96GS6 310 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 OR2V2Q96R30 315 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 NKX6-2Q9C056 277 aaPredicted RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 ARV1Q9H2C2 271 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 TRIM64BA6NI03 449 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 CDX4O14627 284 aaPredicted RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 WISP2O76076 250 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 HSPB1P04792 205 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 OR5G3P0C626 314 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 CD37P11049 281 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC25A42Q86VD7 318 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 ZIC4Q8N9L1 334 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 ABHD14AQ9BUJ0 271 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 COL10A1Q03692 680 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 PNLIPRP3Q17RR3 467 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 LPCAT3Q6P1A2 487 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 RPRMLQ8N4K4 120 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 OR4F5Q8NH21 305 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 ITLN1Q8WWA0 313 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 HS3ST6Q96QI5 342 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 OR4F4Q96R69 305 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 A0A0A6YYD4 124 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 MELTFP08582 738 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 OR8U8P0C7N1 319 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 LYNX1P0DP58 116 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 MPV17LQ2QL34 196 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 MRPS24Q96EL2 167 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 S1PR3Q99500 378 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 MRPL13Q9BYD1 178 aaKnown RBP9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 GAB2Q9UQC2 676 aa9.27□□□□□ -0.93
TGFBR1-209ENST00000552516 C7orf66A4D0T2 115 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 C1orf196B1AJZ1 125 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 E5RGE8 158 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 OR2H2O95918 312 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 ACP1P24666 158 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 MPV17P39210 176 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 P2RY4P51582 365 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 USF2Q15853 346 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 ACSM6Q6P461 480 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 LRFN3Q9BTN0 628 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 RSRP1Q9BUV0 290 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 NTF4P34130 210 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 GNB2P62879 340 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 LAMTOR1Q6IAA8 161 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 PRR27Q6MZM9 219 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 JMJD6Q6NYC1 403 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 KLF14Q8TD94 323 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 FGF11Q92914 225 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 RASL12Q9NYN1 266 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 IGLV3-12A0A075B6K2 115 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 LRRC30A6NM36 301 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 H0Y8G0 127 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 GP1BAP07359 652 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 CHATP28329 748 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 HOXD11P31277 338 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 OR5B12Q96R08 314 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 RSG1Q9BU20 258 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 TMEM30CPA0ZSE6 113 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 SELLP14151 372 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 NDUFA6P56556 154 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 HBG1P69891 147 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 HBG2P69892 147 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 FAM53AQ6NSI3 398 aaPredicted RBP9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 LRP11Q86VZ4 500 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 GHRLQ9UBU3 117 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 PLXNA2O75051 1894 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 OR7C2O60412 319 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 FBP1P09467 338 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC25A6P12236 298 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 HGFACQ04756 655 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 ZDHHC22Q8N966 263 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 FAM131CQ96AQ9 280 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 HIPK2Q9H2X6 1198 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 SPRR3Q9UBC9 169 aa9.26□□□□□ -0.93
TGFBR1-209ENST00000552516 CTDSPLO15194 276 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SNAPINO95295 136 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SFTA3P0C7M3 94 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 A0A1W2PNV4 684 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 ZNF705GA8MUZ8 300 aaPredicted RBP9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 CCL21O00585 134 aa9.25□□□□□ -0.93
TGFBR1-209ENST00000552516 SLC25A4P12235 298 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms