RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 LALBAP00709 142 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 RPSAP08865 295 aaKnown RBP9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 MYCNOSP40205 109 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ETV1P50549 477 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 RASSF2P50749 326 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 RAB7AP51149 207 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF134P52741 427 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 F2RL1P55085 397 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 RAB25P57735 213 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 PAX5Q02548 391 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF816Q0VGE8 651 aaPredicted RBP9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 OR2G6Q5TZ20 316 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF695Q8IW36 515 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 TMEM104Q8NE00 496 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 OR51D1Q8NGF3 324 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ST6GALNAC6Q969X2 333 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 PRR25Q96S07 402 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 DCLRE1BQ9H816 532 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 PCDHB16Q9NRJ7 776 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 ORC6Q9Y5N6 252 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
PRPF40B-212ENST00000551111 NCBP2LA6PVI3 153 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 CCL24O00175 119 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 CIB2O75838 187 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 ATP5HO75947 161 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 OR7C1O76099 320 aaPredicted RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 FADS2O95864 444 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 SERPINA2P20848 420 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 VHLP40337 213 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 GPR12P47775 334 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 GBX2P52951 348 aaPredicted RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 RBM11P57052 281 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 NKAPLQ5M9Q1 402 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 OR52N1Q8NH53 320 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 ARL11Q969Q4 196 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 WWC2-AS2Q96NR7 200 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 ABCG5Q9H222 651 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 ZFP57Q9NU63 452 aa9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 MRPS18AQ9NVS2 196 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-212ENST00000551111 LOC100130705A0A1B0GUX0 176 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 SDCBPO00560 298 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 MT-ND4P03905 459 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 GAPDHP04406 335 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 CFHR3Q02985 330 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 RAB40BQ12829 278 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 DOC2BQ14184 412 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 ATAD3CQ5T2N8 411 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 DDI2Q5TDH0 399 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 SLC16A12Q6ZSM3 486 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 TGIF2LXQ8IUE1 241 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 ZFP41Q8N8Y5 198 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF439Q8NDP4 499 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 OR10A7Q8NGE5 316 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 RTN4IP1Q8WWV3 396 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 RITA1Q96K30 269 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 IFT22Q9H7X7 185 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 FAM118AQ9NWS6 357 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 GFOD1Q9NXC2 390 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 CLEC2DQ9UHP7 191 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 SCOCQ9UIL1 159 aa9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 LSM4Q9Y4Z0 139 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-212ENST00000551111 TRAV8-7A0A075B6U6 113 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 TMEM30CPA0ZSE6 113 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 SNTNA6NMZ2 147 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 C12orf77C9JDV5 145 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 AP4M1O00189 453 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 MAGEB3O15480 346 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 OGG1O15527 345 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 GZMHP20718 246 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF93P35789 620 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 KCNJ3P48549 501 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 RPS11P62280 158 aaKnown RBP eCLIP9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 DGCR2P98153 550 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 GPR50Q13585 617 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 PNLIPRP3Q17RR3 467 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 SLC22A6Q4U2R8 563 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 CT45A1Q5HYN5 189 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 NHLRC3Q5JS37 347 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 TEX38Q6PEX7 206 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 ZNF497Q6ZNH5 498 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 FOXRED2Q8IWF2 684 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 IZUMO1Q8IYV9 350 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 LINC00311Q8N616 119 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 OR10V1Q8NGI7 309 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 OR2T10Q8NGZ9 312 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 OR1L1Q8NH94 360 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 CT45A3Q8NHU0 189 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 GPR148Q8TDV2 347 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 DPF1Q92782 380 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 MRPL48Q96GC5 212 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 S1PR3Q99500 378 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 ASCL2Q99929 193 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 KLK15Q9H2R5 256 aa9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 FGF20Q9NP95 211 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-212ENST00000551111 IL36GQ9NZH8 169 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms