RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PLPPR1Q8TBJ4 325 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 CABLES2Q9BTV7 478 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 TLNRD1Q9H1K6 362 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 PARP11Q9NR21 331 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 UQCC1Q9NVA1 299 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 OR2W1Q9Y3N9 320 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 H0YL77 283 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 SLC33A1O00400 549 aaPredicted RBP15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 AQP7O14520 342 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 NKX2-1P43699 371 aaPredicted RBP15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 POLR2GP62487 172 aaKnown RBP eCLIP15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 GNMTQ14749 295 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 NMSQ5H8A3 153 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 Q6ZRG5 221 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 CMTM1Q8IZ96 169 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 BOD1Q96IK1 185 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 PARP12Q9H0J9 701 aaKnown RBP15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 OR1A1Q9P1Q5 309 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 KIAA2026Q5HYC2 2103 aa15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 INTS1Q8N201 2190 aaKnown RBP15.71■□□□□ 0.11
PRPF40B-208ENST00000548436 TRAV17A0A0B4J275 112 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 IQCF6A8MYZ5 107 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 TRIM77I1YAP6 450 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 AGFG2O95081 481 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 PGA5P0DJD9 388 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 SELEP16581 610 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 MPV17P39210 176 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 CXorf66Q5JRM2 361 aaPredicted RBP15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 SVBPQ8N300 66 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 IL1F10Q8WWZ1 152 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 NRIP2Q9BQI9 281 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 GINS3Q9BRX5 216 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 ERRFI1Q9UJM3 462 aaPredicted RBP15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 CARHSP1Q9Y2V2 147 aaKnown RBP15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 CACNA1GO43497 2377 aa15.71■□□□□ 0.1
PRPF40B-208ENST00000548436 MUC6Q6W4X9 2439 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 BORCS7-ASMTA0A0B4J1R7 106 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 FAM24AA6NFZ4 105 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 H0Y980 276 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 ASCL1P50553 236 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 EWSR1Q01844 656 aaKnown RBP eCLIP15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 ZNF169Q14929 603 aaPredicted RBP15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 Q8IYB0 196 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 WDR31Q8NA23 367 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 SPIN2AQ99865 258 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 SPIN2BQ9BPZ2 258 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 POLDIP2Q9Y2S7 368 aa15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 CNOT1A5YKK6 2376 aaKnown RBP15.7■□□□□ 0.1
PRPF40B-208ENST00000548436 CLEC18AA5D8T8 446 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 AGPAT2O15120 278 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 F12P00748 615 aaPredicted RBP15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 SEC11BP0C7V7 166 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 SPP1P10451 314 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 FOXF2Q12947 444 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 DEFB109BQ30KR1 87 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 ZNF497Q6ZNH5 498 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 OR2C3Q8N628 320 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 CLEC18CQ8NCF0 446 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 OR5D13Q8NGL4 314 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 LYPD6BQ8NI32 183 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 KLF14Q8TD94 323 aaPredicted RBP15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 MAGT1Q9H0U3 335 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 SH3BGRL3Q9H299 93 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 TREM2Q9NZC2 230 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 DSPP15924 2871 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 DUXBA0A1W2PPF3 345 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 NXPH2O95156 264 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 GRPP07492 148 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 OR8U9P0C7N5 309 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 CBR1P16152 277 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 COX5AP20674 150 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 VDAC1P21796 283 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 F2RP25116 425 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 MDH2P40926 338 aaKnown RBP15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 F2RL1P55085 397 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 OR8U1Q8NH10 309 aa15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 FAM212BQ9NTI7 297 aaPredicted RBP15.69■□□□□ 0.1
PRPF40B-208ENST00000548436 IGSF23A1L1A6 192 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 RNASEK-C17orf49H0YIS7 233 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 SSSCA1O60232 199 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 CNOT4O95628 575 aaKnown RBP15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 IGKV3-15P01624 115 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 ZNF146Q15072 292 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 OR8G1Q15617 311 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 SWI5Q1ZZU3 235 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 PRR18Q8N4B5 295 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 SEC11CQ9BY50 192 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 TINAGQ9UJW2 476 aa15.68■□□□□ 0.1
PRPF40B-208ENST00000548436 NPIPB11E5RHQ5 1161 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 IGLV2-14P01704 120 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 DANCRP0C864 163 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 OR10V1Q8NGI7 309 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 UBALD1Q8TB05 177 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 SARAFQ96BY9 339 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 C9JQL5 133 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 MLNRO43193 412 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 NXPH3O95157 252 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 SVILO95425 2214 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 CD5P06127 495 aa15.67■□□□□ 0.1
PRPF40B-208ENST00000548436 HOXB1P14653 301 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms