RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 TOMM40LQ969M1 308 aa13.11□□□□□ -0.31
CCND1-205ENST00000542367 A0A1W2PPE3 182 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 MT-ND4P03905 459 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 OPN1MWP04001 364 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 OPN1MW2P0DN77 364 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 OPN1MW3P0DN78 364 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 MADCAM1Q13477 382 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 DIAPH2-AS1Q14236 149 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 LYPD6Q86Y78 171 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 UBALD1Q8TB05 177 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 ARL11Q969Q4 196 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 MRPS24Q96EL2 167 aaKnown RBP13.1□□□□□ -0.31
CCND1-205ENST00000542367 BANF2Q9H503 90 aa13.1□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A18PA6NE21 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A16PA6NEW6 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A20PA6NIJ5 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 SH2D7A6NKC9 451 aaPredicted RBP13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A9PA6NNJ1 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A12PA8MX19 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A5PA8MXJ8 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 MCRIP1C9JLW8 97 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 C15orf65H3BRN8 121 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 AIPO00170 330 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 AMY1AP04745 511 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 AMY2AP04746 511 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 LPLP06858 475 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A15PP0C7V4 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A13PP0C7W8 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A14PP0C7W9 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 FAM90A24PP0C7X0 464 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 INSL4Q14641 139 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 ACSM3Q53FZ2 586 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 RNLSQ5VYX0 342 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 CENPVQ7Z7K6 275 aaPredicted RBP13.09□□□□□ -0.31
CCND1-205ENST00000542367 NDUFA11Q86Y39 141 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 THNSL2Q86YJ6 484 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 OR5AU1Q8NGC0 362 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 THRSPQ92748 146 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 MND1Q9BWT6 205 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 SELENOIQ9C0D9 397 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 SPACA1Q9HBV2 294 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
CCND1-205ENST00000542367 RCC2Q9P258 522 aaKnown RBP13.09□□□□□ -0.31
CCND1-205ENST00000542367 A0A1W2PPI3 338 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 ADARB2-AS1A8MUL3 147 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 SDCBPO00560 298 aaPredicted RBP13.08□□□□□ -0.32
CCND1-205ENST00000542367 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
CCND1-205ENST00000542367 SNRNP70P08621 437 aaKnown RBP13.08□□□□□ -0.32
CCND1-205ENST00000542367 MGMTP16455 207 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 MAPK3P27361 379 aaPredicted RBP13.08□□□□□ -0.32
CCND1-205ENST00000542367 VHLP40337 213 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 RAB7AP51149 207 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 AQP4P55087 323 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.32
CCND1-205ENST00000542367 C9orf152Q5JTZ5 239 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 RAB12Q6IQ22 244 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 UNQ9370/PRO34162Q6UXP9 181 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 DRAM1Q8N682 238 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 NKAIN3Q8N8D7 197 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 TMEM104Q8NE00 496 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 OR52M1Q8NGK5 317 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 SGCDQ92629 289 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 MYDGFQ969H8 173 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 R3HDM4Q96D70 268 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 ETAA1Q9NY74 926 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 PEX16Q9Y5Y5 336 aa13.08□□□□□ -0.32
CCND1-205ENST00000542367 NOTCH1P46531 2555 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 G3V4G9 280 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 ORC5O43913 435 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 GP2P55259 537 aaKnown RBP13.07□□□□□ -0.32
CCND1-205ENST00000542367 LOXL3P58215 753 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 HES1Q14469 280 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 SPHARQ15513 63 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 FAM27D1Q5T7N8 215 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 SYT6Q5T7P8 510 aaPredicted RBP13.07□□□□□ -0.32
CCND1-205ENST00000542367 FAM53AQ6NSI3 398 aaPredicted RBP13.07□□□□□ -0.32
CCND1-205ENST00000542367 OR8H3Q8N146 312 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 MS4A15Q8N5U1 240 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 OR4K15Q8NH41 348 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 UQCC2Q9BRT2 126 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 TMED9Q9BVK6 235 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 GFOD1Q9NXC2 390 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 TRAPPC2LQ9UL33 140 aa13.07□□□□□ -0.32
CCND1-205ENST00000542367 PLXNB1O43157 2135 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 H0YHG0 523 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 M0QZK8 103 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 TMEM11P17152 192 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 CD83Q01151 205 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 HNF4GQ14541 408 aa13.06□□□□□ -0.32
CCND1-205ENST00000542367 MED22Q15528 200 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms