RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 TMEM100Q9NV29 134 aa12.84□□□□□ -0.35
USP35-204ENST00000530267 ZDHHC8Q9ULC8 765 aa12.84□□□□□ -0.35
USP35-204ENST00000530267 POLDIP2Q9Y2S7 368 aa12.84□□□□□ -0.35
USP35-204ENST00000530267 NSG2Q9Y328 171 aa12.84□□□□□ -0.35
USP35-204ENST00000530267 APC2O95996 2303 aa12.84□□□□□ -0.35
USP35-204ENST00000530267 A6NLC8 198 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 KLK10O43240 276 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 ADAM20O43506 726 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 COX5AP20674 150 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 ID4P47928 161 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 HLA-DRB3P79483 266 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.35
USP35-204ENST00000530267 STARD4Q96DR4 205 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 NRIP2Q9BQI9 281 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 PIGMQ9H3S5 423 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.35
USP35-204ENST00000530267 TMED3Q9Y3Q3 217 aa12.83□□□□□ -0.35
USP35-204ENST00000530267 TAAR5O14804 337 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 TSPAN4O14817 238 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 ST8SIA3O43173 380 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 HSPA12AO43301 675 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 TIMM8AO60220 97 aaPredicted RBP12.83□□□□□ -0.36
USP35-204ENST00000530267 MED6O75586 246 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 PGA5P0DJD9 388 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 PRAMEF6Q5VXH4 476 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 CMTM1Q8IZ96 169 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 SELENOHQ8IZQ5 122 aaKnown RBP12.83□□□□□ -0.36
USP35-204ENST00000530267 FAM185AQ8N0U4 392 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
USP35-204ENST00000530267 LPAR3Q9UBY5 353 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 PROCRQ9UNN8 238 aa12.83□□□□□ -0.36
USP35-204ENST00000530267 J3QW42 95 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 AGPAT2O15120 278 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 CEACAM4O75871 244 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 CTXN2P0C2S0 81 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 CEACAM1P13688 526 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 ERVK11-1P61568 191 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 POLR2GP62487 172 aaKnown RBP eCLIP12.82□□□□□ -0.36
USP35-204ENST00000530267 OR4A4PQ8NGN8 299 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 ESRP2Q9H6T0 727 aaKnown RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 PLEKHA2Q9HB19 425 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 PLSCR4Q9NRQ2 329 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 PLA2G2EQ9NZK7 142 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 PURGQ9UJV8 347 aaKnown RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 OR2W1Q9Y3N9 320 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 RBM7Q9Y580 266 aaKnown RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 AHRRA9YTQ3 701 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 PGLYRP1O75594 196 aaPredicted RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 LPAR6P43657 344 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 PXDC1Q5TGL8 231 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 ZNF324BQ6AW86 544 aaPredicted RBP12.82□□□□□ -0.36
USP35-204ENST00000530267 OR4D5Q8NGN0 318 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 WFDC1Q9HC57 220 aa12.82□□□□□ -0.36
USP35-204ENST00000530267 SH2D1BO14796 132 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 SSSCA1O60232 199 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 PSPNO60542 156 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 M6PRP20645 277 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 EPHA1P21709 976 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 OMGP23515 440 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 CAV2P51636 162 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 IZUMO4Q1ZYL8 232 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 MST1LQ2TV78 715 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 IGF2-ASQ6U949 168 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 Q8IYB0 196 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 DMBX1Q8NFW5 382 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 GTF3AQ92664 365 aaKnown RBP12.81□□□□□ -0.36
USP35-204ENST00000530267 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 LRRC46Q96FV0 321 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 ZNF71Q9NQZ8 489 aaPredicted RBP12.81□□□□□ -0.36
USP35-204ENST00000530267 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 ABCD4O14678 606 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 JTBO76095 146 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 CNOT4O95628 575 aaKnown RBP12.81□□□□□ -0.36
USP35-204ENST00000530267 GNMTQ14749 295 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 ZNF880Q6PDB4 577 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 Q6ZR03 302 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 H1FOOQ8IZA3 346 aaPredicted RBP12.81□□□□□ -0.36
USP35-204ENST00000530267 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
USP35-204ENST00000530267 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 CDS2O95674 445 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 HAND1O96004 215 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 ZNF16P17020 682 aaPredicted RBP12.8□□□□□ -0.36
USP35-204ENST00000530267 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
USP35-204ENST00000530267 SRPXP78539 464 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 FAM53AQ6NSI3 398 aaPredicted RBP12.8□□□□□ -0.36
USP35-204ENST00000530267 BHLHA15Q7RTS1 189 aaPredicted RBP12.8□□□□□ -0.36
USP35-204ENST00000530267 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 KCNS2Q9ULS6 477 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 POMT1Q9Y6A1 747 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 TRBV6-6A0A0A6YYG2 114 aa12.8□□□□□ -0.36
USP35-204ENST00000530267 IGHV2OR16-5A0A0B4J2B6 119 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms