RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 HRH4Q9H3N8 390 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 RHOFQ9HBH0 211 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 MSL2Q9HCI7 577 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 PLSCR3Q9NRY6 295 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 MRPS18AQ9NVS2 196 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 GHRLQ9UBU3 117 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 SLC7A11Q9UPY5 501 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 LRP12Q9Y561 859 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 ARID1AO14497 2285 aa5.3□□□□□ -1.56
ATPAF1-209ENST00000529214 IGHV4-30-2A0A087WSY4 118 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CD300LBA8K4G0 201 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 ST8SIA3O43173 380 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 XRCC2O43543 280 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 SPRY3O43610 288 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 SRSF10O75494 262 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 NCR1O76036 304 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CD55P08174 381 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CSF3P09919 207 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CRYBB2P43320 205 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CAMPP49913 170 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 PDLIM4P50479 330 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RPL23AP62750 156 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RPL19P84098 196 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 FAM3AP98173 230 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 ZNF85Q03923 595 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RAB31Q13636 194 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 FHL3Q13643 280 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 HAGHQ16775 308 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 MICBQ29980 383 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 COX19Q49B96 90 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 OR5AS1Q8N127 324 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RFLNBQ8N5W9 214 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 ACBD7Q8N6N7 88 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 UXS1Q8NBZ7 420 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 BEND2Q8NDZ0 799 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 OR52B4Q8NGK2 314 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 OR13G1Q8NGZ3 307 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 OR2AE1Q8NHA4 323 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 C10orf105Q8TEF2 133 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 TCTEX1D2Q8WW35 142 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RAB40AQ8WXH6 277 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 FAM168AQ92567 244 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RDH5Q92781 318 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 C12orf43Q96C57 262 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 LGALS12Q96DT0 336 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 AKR1E2Q96JD6 320 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 TBX5Q99593 518 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 REG4Q9BYZ8 158 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 OR10A2Q9H208 303 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 AMBNQ9NP70 447 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 DLL4Q9NR61 685 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 TMEM100Q9NV29 134 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 FAM206AQ9NX38 181 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 MRM2Q9UI43 246 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 IKZF2Q9UKS7 526 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 STUB1Q9UNE7 303 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 RPL36Q9Y3U8 105 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 U3KQE9 123 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 MAST4O15021 2626 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 MYO9AB2RTY4 2548 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 CCDC168Q8NDH2 2452 aa5.29□□□□□ -1.56
ATPAF1-209ENST00000529214 TRBV7-9A0A0J9YWB2 115 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 DAPL1A0PJW8 107 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 GGT3PA6NGU5 568 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 ANXA2P2A6NMY6 339 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 LYNX1G3V0Z9 82 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 H0YL77 283 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SNAI2O43623 268 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 FADS2O95864 444 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 IGLV3-1P01715 115 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 TCRBP04435 133 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 RRASP10301 218 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SLC25A16P16260 332 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SERPINA2P20848 420 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 ACHEP22303 614 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SLC6A1P30531 599 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 CD200P41217 278 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 RAB40BQ12829 278 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SMN1Q16637 294 aaKnown RBP5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 RNF151Q2KHN1 245 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SPRNQ5BIV9 151 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 CLLU1Q5K131 121 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 TMEM200BQ69YZ2 307 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 ZNF782Q6ZMW2 699 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 C8orf59Q8N0T1 100 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 OR2Z1Q8NG97 314 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 OR8B12Q8NGG6 310 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 CNIH3Q8TBE1 160 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 SPRYD4Q8WW59 207 aaPredicted RBP5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 DEDD2Q8WXF8 326 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 REEP6Q96HR9 211 aa5.28□□□□□ -1.56
ATPAF1-209ENST00000529214 C18orf12Q96KH6 178 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms