RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FAM78BQ5VT40 261 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 Q6ZRU5 148 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 FAM19A3Q7Z5A8 133 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 VN1R4Q7Z5H5 301 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 TMEM179BQ7Z7N9 219 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 EIF4E3Q8N5X7 224 aaKnown RBP2.97□□□□□ -1.93
SKP1-209ENST00000522552 OR52L1Q8NGH7 329 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 OR51A2Q8NGJ7 313 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 GRPEL2Q8TAA5 225 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 GTSF1Q8WW33 167 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 C11orf40Q8WZ69 217 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 C18orf15Q96N68 181 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 ATOH8Q96SQ7 321 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 ZNF649Q9BS31 505 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 FGFBP2Q9BYJ0 223 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 SLC17A9Q9BYT1 436 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 ULBP3Q9BZM4 244 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 ZNF556Q9HAH1 456 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 C14orf105Q9NVL8 296 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 ASTN1O14525 1302 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 PIKFYVEQ9Y2I7 2098 aa2.97□□□□□ -1.93
SKP1-209ENST00000522552 KIF15Q9NS87 1388 aa2.96□□□□□ -1.93
SKP1-209ENST00000522552 IGHV2-26A0A0B4J1V2 119 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 FAM236DA0A1B0GTK5 79 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 A0A1W2PQ67 120 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 PRORSD1PA6NEY8 169 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 KPNA4O00629 521 aaPredicted RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 PDE6DO43924 150 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 MMP23AO75900 390 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 FAM228BP0C875 321 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 SULT1A3P0DMM9 295 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 SULT1A4P0DMN0 295 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 FAM236CP0DP71 79 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 IFI30P13284 250 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 NELFEP18615 380 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 CTBP2P56545 445 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 HLA-DRB3P79483 266 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 EBPQ15125 230 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 ORMDL2Q53FV1 153 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 FAM201AQ5SY85 155 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 LCN8Q6JVE9 175 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 LPCAT3Q6P1A2 487 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 Q6ZSR6 202 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 ZNRF2Q8NHG8 242 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 JOSD2Q8TAC2 188 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 MRPL48Q96GC5 212 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 NRIP2Q9BQI9 281 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 PARP12Q9H0J9 701 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 HES4Q9HCC6 221 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 PARP11Q9NR21 331 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 GSKIPQ9P0R6 139 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 OR52A1Q9UKL2 312 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 PAIP2BQ9ULR5 123 aaKnown RBP2.96□□□□□ -1.94
SKP1-209ENST00000522552 PROCRQ9UNN8 238 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 POMPQ9Y244 141 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 HSPB11Q9Y547 144 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 NAV1Q8NEY1 1877 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 MYH2Q9UKX2 1941 aa2.96□□□□□ -1.94
SKP1-209ENST00000522552 GRIN2BQ13224 1484 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 C5orf49A4QMS7 147 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ZNF850A8MQ14 1090 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ZNF705GA8MUZ8 300 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 NDUFC2-KCTD14E9PQ53 114 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 COPEO14579 308 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 GYG2O15488 501 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 MFSD11O43934 449 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CRYBA1P05813 215 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 S100A1P23297 94 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 GADD45AP24522 165 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 IL3RAP26951 378 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 MDH2P40926 338 aaKnown RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 NANOS2P60321 138 aaKnown RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 HSPE1P61604 102 aaKnown RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 RHOBP62745 196 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ERCC8Q13216 396 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 RSPO1Q2MKA7 263 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 KRTAP27-1Q3LI81 207 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 UBE2NLQ5JXB2 153 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 C1orf194Q5T5A4 169 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 NXNL2Q5VZ03 156 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CEMP1Q6PRD7 247 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 SHISA6Q6ZSJ9 500 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 SLC16A13Q7RTY0 426 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 CLVS1Q8IUQ0 354 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 DEFB125Q8N687 156 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 OR2M7Q8NG81 312 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 OR52P1PQ8NH57 321 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 OR5K1Q8NHB7 308 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 SLC35E1Q96K37 410 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 SLC35G5Q96KT7 338 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TIMM17AQ99595 171 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 ZNF436Q9C0F3 470 aaPredicted RBP2.95□□□□□ -1.94
SKP1-209ENST00000522552 PARVBQ9HBI1 364 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TMEM216Q9P0N5 145 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 PYCARDQ9ULZ3 195 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 SMARCA2P51531 1590 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 TSPOAP1O95153 1857 aa2.95□□□□□ -1.94
SKP1-209ENST00000522552 IGSF23A1L1A6 192 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms