RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GTF2H1P32780 548 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 TAS2R43P59537 309 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 CDC20Q12834 499 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 FLOT2Q14254 428 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 C5orf47Q569G3 176 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 CYP4Z1Q86W10 505 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 ORMDL3Q8N138 153 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 CYP4Z2PQ8N1L4 340 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF738Q8NE65 137 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR2AE1Q8NHA4 323 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 ORAOV1Q8WV07 137 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 BLNKQ8WV28 456 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 RORBQ92753 470 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 LRRC45Q96CN5 670 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 LINC00167Q96N53 147 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF649Q9BS31 505 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 SPZ1Q9BXG8 430 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 DIABLOQ9NR28 239 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 FBXO6Q9NRD1 293 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 TAS2R5Q9NYW4 299 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 SNX24Q9Y343 169 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 CBY1Q9Y3M2 126 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 DCHS1Q96JQ0 3298 aa3.24□□□□□ -1.89
HMGB1P3-201ENST00000502802 DOCK8Q8NF50 2099 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 LOC102724200A0A096LPH7 203 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 TMEM72A0PK05 275 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR2AT4A6NND4 320 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 MKRN2OSH3BPM6 223 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CLDN34H7C241 214 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 SULT1C2O00338 296 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 UBDO15205 165 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 MAGEB4O15481 346 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CRXO43186 299 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CALUO43852 315 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF324O75467 553 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 MAS1P04201 325 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 NPY1RP25929 384 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 TEAD1P28347 426 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 PLXNA3P51805 1871 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 SLC18A1P54219 525 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 AQP5P55064 265 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CMC4P56277 68 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 PRKCDQ05655 676 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 MGAT3Q09327 533 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 COL27A1Q8IZC6 1860 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 LINC00337Q8N6G1 96 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 UBA3Q8TBC4 463 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 C22orf15Q8WYQ4 148 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 STARD4Q96DR4 205 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 PSTPIP2Q9H939 334 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 SDHAF3Q9NRP4 125 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CA10Q9NS85 328 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 RAB22AQ9UL26 194 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF292O60281 2723 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 MYH11P35749 1972 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 CACNA1HO95180 2353 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 LAMA1P25391 3075 aa3.23□□□□□ -1.89
HMGB1P3-201ENST00000502802 NRCAMQ92823 1304 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 IGHV1-3A0A0C4DH29 117 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 A0A1B0GTI1 187 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZNF233A6NK53 670 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 A8MWL6 223 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 C5orf67F2Z3F1 127 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 M0QXV9 152 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 UPK2O00526 184 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 TPM3P06753 285 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 IL9P15248 144 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 NELFEP18615 380 aaKnown RBP3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 HTR2BP41595 481 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 CRATP43155 626 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 TTPAP49638 278 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 SARNPP82979 210 aaKnown RBP3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 PITPNAQ00169 270 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 CEACAM21Q3KPI0 293 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 ATP6AP1LQ52LC2 224 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 CCDC122Q5T0U0 273 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 SSX7Q7RTT5 188 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR2Z1Q8NG97 314 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 OR7G1Q8NGA0 311 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 PHF10Q8WUB8 498 aaKnown RBP3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 DNAJB3Q8WWF6 145 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 DSN1Q9H410 356 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 RBM22Q9NW64 420 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 INSIG2Q9Y5U4 225 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 RIF1Q5UIP0 2472 aaKnown RBP3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 VWA8A3KMH1 1905 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 ANK1P16157 1881 aa3.22□□□□□ -1.89
HMGB1P3-201ENST00000502802 ZFHX2Q9C0A1 2572 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 CITO14578 2027 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 FANCMQ8IYD8 2048 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 FAM186AA6NE01 2351 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 IGLV4-60A0A075B6I1 120 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 KIR2DS1A0A191URI9 304 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 A0A1B0GX12 115 aa3.21□□□□□ -1.9
HMGB1P3-201ENST00000502802 RBFOX3A6NFN3 312 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms