RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	SULT1B1	O43704	296 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	IGHV3-43D	P0DP04	118 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	PAX5	Q02548	391 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	TMED1	Q13445	227 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	ALKBH1	Q13686	389 aa	Known RBP	10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	ZDHHC13	Q8IUH4	622 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	FAM71E2	Q8N5Q1	922 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	SUMF2	Q8NBJ7	301 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	OR10A7	Q8NGE5	316 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	MYOZ3	Q8TDC0	251 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	RNFT2	Q96EX2	444 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	C4orf36	Q96KX1	117 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	KCTD7	Q96MP8	289 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	OR5B12	Q96R08	314 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161	RASL11B	Q9BPW5	248 aa		10.65	□□□□□ -0.7
SAMM50-204	ENST00000493161		I3L521	148 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	MOS	P00540	346 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	FRMD6-AS1	P0C7T7	363 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	VDAC1	P21796	283 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	CD1B	P29016	333 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	GNB1	P62873	340 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	IL13RA2	Q14627	380 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZFAND6	Q6FIF0	208 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	KCTD20	Q7Z5Y7	419 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	PARP16	Q8N5Y8	322 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	PXT1	Q8NFP0	134 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	OR51A2	Q8NGJ7	313 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	OR5D14	Q8NGL3	314 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	OR1N2	Q8NGR9	330 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	CCDC107	Q8WV48	283 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	TNFAIP8L1	Q8WVP5	186 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	RFK	Q969G6	155 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	DPCD	Q9BVM2	203 aa	Predicted RBP	10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	GABARAPL3	Q9BY60	117 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	ISG20L2	Q9H9L3	353 aa	Known RBP	10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	AASS	Q9UDR5	926 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161	STARD9	Q9P2P6	4700 aa		10.64	□□□□□ -0.71
SAMM50-204	ENST00000493161		E9PI62	339 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161		G3V318	75 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SDCBP	O00560	298 aa	Predicted RBP	10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	RRP9	O43818	475 aa	Known RBP	10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	HTR3B	O95264	441 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	IGF1	P05019	195 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SLC2A2	P11168	524 aa	Predicted RBP	10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SPN	P16150	400 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SOX6	P35712	828 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	VHL	P40337	213 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF134	P52741	427 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	DNAL1	Q4LDG9	190 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SATL1	Q86VE3	508 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	SERPINA12	Q8IW75	414 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	LINC00311	Q8N616	119 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF491	Q8N8L2	437 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	DCUN1D4	Q92564	292 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	ARL11	Q969Q4	196 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	PDCD1LG2	Q9BQ51	273 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	ALX4	Q9H161	411 aa	Predicted RBP	10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	FAM118A	Q9NWS6	357 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	WSB1	Q9Y6I7	421 aa		10.63	□□□□□ -0.71
SAMM50-204	ENST00000493161	TRIM64C	A6NLI5	447 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	CDRT1	O95170	752 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	MYF6	P23409	242 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	PPIF	P30405	207 aa	Known RBP	10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	KCNJ3	P48549	501 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	INSL3	P51460	131 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	RSU1	Q15404	277 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF529	Q6P280	563 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	ASCL4	Q6XD76	172 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	LHFPL3	Q86UP9	236 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	RITA1	Q96K30	269 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	GPER1	Q99527	375 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	FAM192A	Q9GZU8	254 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	PALMD	Q9NP74	551 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	ISYNA1	Q9NPH2	558 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	GFOD1	Q9NXC2	390 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	ENOPH1	Q9UHY7	261 aa		10.62	□□□□□ -0.71
SAMM50-204	ENST00000493161	HYDIN	Q4G0P3	5121 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	TMEM30CP	A0ZSE6	113 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	GEMIN2	O14893	280 aa	Known RBP	10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	OR8U8	P0C7N1	319 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	GZMH	P20718	246 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	FAS	P25445	335 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF616	Q08AN1	781 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	ACBD7	Q8N6N7	88 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	C8orf31	Q8N9H6	132 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF439	Q8NDP4	499 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	OR52M1	Q8NGK5	317 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	RGP1	Q92546	391 aa	Predicted RBP	10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	DLX4	Q92988	240 aa	Predicted RBP	10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	LGALS12	Q96DT0	336 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	CYYR1	Q96J86	154 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	UBE2E2	Q96LR5	201 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	ZNF107	Q9UII5	783 aa	Predicted RBP	10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	OAZ3	Q9UMX2	235 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	DHDH	Q9UQ10	334 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	ST3GAL6	Q9Y274	331 aa		10.61	□□□□□ -0.71
SAMM50-204	ENST00000493161	EXOG	Q9Y2C4	368 aa	Known RBP	10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms