RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 TGP01266 2768 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 SH2D7A6NKC9 451 aaPredicted RBP14.38□□□□□ -0.11
PTPRU-207ENST00000492954 AMY1AP04745 511 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 AMY2AP04746 511 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 CDK1P06493 297 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 LPLP06858 475 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 MADCAM1Q13477 382 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 INSL4Q14641 139 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 ZNF497Q6ZNH5 498 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 NDUFA11Q86Y39 141 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 LYPD6Q86Y78 171 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 CDH26Q8IXH8 852 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 OR56B4Q8NH76 319 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 ARL11Q969Q4 196 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 BANF2Q9H503 90 aa14.38□□□□□ -0.11
PTPRU-207ENST00000492954 RCC2Q9P258 522 aaKnown RBP14.38□□□□□ -0.11
PTPRU-207ENST00000492954 A0A1W2PPE3 182 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 A0A1W2PPI3 338 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 ADARB2-AS1A8MUL3 147 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 PTGES3LE9PB15 166 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 C15orf65H3BRN8 121 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 MT-ND4P03905 459 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 GZMHP20718 246 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 AQP4P55087 323 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 C6orf141Q5SZD1 244 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 SLC16A12Q6ZSM3 486 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 DRAM1Q8N682 238 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 OR10X1Q8NGY0 326 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 NRG4Q8WWG1 115 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 SGCDQ92629 289 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 MND1Q9BWT6 205 aa14.37□□□□□ -0.11
PTPRU-207ENST00000492954 PRKDCP78527 4128 aaKnown RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A18PA6NE21 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A16PA6NEW6 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A20PA6NIJ5 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A9PA6NNJ1 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A12PA8MX19 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A5PA8MXJ8 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 G3V4G9 280 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 AIPO00170 330 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 SNRNP70P08621 437 aaKnown RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A15PP0C7V4 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A13PP0C7W8 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A14PP0C7W9 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM90A24PP0C7X0 464 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM106CPP0CH98 169 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 MAPK3P27361 379 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 VHLP40337 213 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 GABPB1Q06547 395 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 RNLSQ5VYX0 342 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 FAM53AQ6NSI3 398 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 NKAIN3Q8N8D7 197 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 TMEM104Q8NE00 496 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 OR5AU1Q8NGC0 362 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 MRPS24Q96EL2 167 aaKnown RBP14.36□□□□□ -0.11
PTPRU-207ENST00000492954 CYYR1Q96J86 154 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 SELENOIQ9C0D9 397 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 SPACA1Q9HBV2 294 aa14.36□□□□□ -0.11
PTPRU-207ENST00000492954 IGHV3-43A0A0B4J1X8 118 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 MCRIP1C9JLW8 97 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 SDCBPO00560 298 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 CRTAPO75718 401 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 IGHV3-43DP0DP04 118 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 MGMTP16455 207 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 RAB7AP51149 207 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 GP2P55259 537 aaKnown RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 EMX1Q04741 257 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 ACSM3Q53FZ2 586 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 C9orf152Q5JTZ5 239 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 FAM27D1Q5T7N8 215 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 RAB12Q6IQ22 244 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 CENPVQ7Z7K6 275 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 THNSL2Q86YJ6 484 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 OR8H3Q8N146 312 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 THRSPQ92748 146 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 MYDGFQ969H8 173 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 R3HDM4Q96D70 268 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 TMED9Q9BVK6 235 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 ETAA1Q9NY74 926 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 LSM2Q9Y333 95 aaKnown RBP14.35□□□□□ -0.11
PTPRU-207ENST00000492954 MOB4Q9Y3A3 225 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 PEX16Q9Y5Y5 336 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 NOTCH3Q9UM47 2321 aa14.35□□□□□ -0.11
PTPRU-207ENST00000492954 A0A1W2PRX2 142 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 M0QZK8 103 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 ORC5O43913 435 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 LOXL3P58215 753 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 HES1Q14469 280 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 SPHARQ15513 63 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 SYT6Q5T7P8 510 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-207ENST00000492954 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 UNQ9370/PRO34162Q6UXP9 181 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 OR52M1Q8NGK5 317 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 OR4K15Q8NH41 348 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 FAM46BQ96A09 425 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 Q96M66 194 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 UQCC2Q9BRT2 126 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 GFOD1Q9NXC2 390 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 SCN3BQ9NY72 215 aa14.34□□□□□ -0.11
PTPRU-207ENST00000492954 TRAPPC2LQ9UL33 140 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms