RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 CDK10Q15131 360 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 CHRFAM7AQ494W8 412 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 CCBE1Q6UXH8 406 aaPredicted RBP12.03□□□□□ -0.48
LRIF1-202ENST00000485275 MOB1BQ7L9L4 216 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
LRIF1-202ENST00000485275 PRR18Q8N4B5 295 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 PPP1R35Q8TAP8 253 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 DEDD2Q8WXF8 326 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 TIMD4Q96H15 378 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 MED30Q96HR3 178 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 KIRREL1Q96J84 757 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 GSX2Q9BZM3 304 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
LRIF1-202ENST00000485275 F5H0A9 414 aaPredicted RBP12.02□□□□□ -0.48
LRIF1-202ENST00000485275 NDUFA2O43678 99 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 WNT2P09544 360 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 RPS2P15880 293 aaKnown RBP12.02□□□□□ -0.48
LRIF1-202ENST00000485275 ARPC4P59998 168 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 ZNF273Q14593 569 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 KCNJ8Q15842 424 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 UTF1Q5T230 341 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 DUSP18Q8NEJ0 188 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 OR5D13Q8NGL4 314 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 OR1L1Q8NH94 360 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 ENKURQ8TC29 256 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 CABLES2Q9BTV7 478 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 TMPRSS13Q9BYE2 586 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 SLC2A8Q9NY64 477 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 OR1A1Q9P1Q5 309 aa12.02□□□□□ -0.48
LRIF1-202ENST00000485275 ABCA2Q9BZC7 2435 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 MALRD1Q5VYJ5 2156 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 FAM240BA0A1B0GVZ2 78 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 NAP1L6A6NFF2 107 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 H7C1Q1 480 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 CGB3P0DN86 165 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 CGB7P0DN87 165 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 MEF2DQ14814 521 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 CR1LQ2VPA4 569 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 TRIM16LQ309B1 348 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 ACTBL2Q562R1 376 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 AADACL3Q5VUY0 350 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 MZT2BQ6NZ67 158 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
LRIF1-202ENST00000485275 LHFPL1Q86WI0 220 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 PARP12Q9H0J9 701 aaKnown RBP12.02□□□□□ -0.49
LRIF1-202ENST00000485275 FLVCR2Q9UPI3 526 aa12.02□□□□□ -0.49
LRIF1-202ENST00000485275 PDZD2O15018 2839 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 DOCK11Q5JSL3 2073 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 A0A0B4J293 547 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 POM121CA8CG34 1229 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 CENPXA8MT69 81 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 BET1O15155 118 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 NDUFB3O43676 98 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 OR5H8P0DN80 308 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 FAUP35544 74 aaKnown RBP12.01□□□□□ -0.49
LRIF1-202ENST00000485275 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 OR3A3P47888 321 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 KIR2DS1Q14954 304 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 C17orf58Q2M2W7 97 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 SCGB2B2Q4G0G5 96 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 LRRC10Q5BKY1 277 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 IDO2Q6ZQW0 420 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 LDLRAD3Q86YD5 345 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 C10orf105Q8TEF2 133 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 NUDT15Q9NV35 164 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 SVEP1Q4LDE5 3571 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 ARHGAP32A7KAX9 2087 aa12.01□□□□□ -0.49
LRIF1-202ENST00000485275 IGHV4-30-2A0A087WSY4 118 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 OR5H14A6NHG9 310 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 VWC2LB2RUY7 222 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 HBZP02008 142 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 TCRBP04435 133 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 NFYAP23511 347 aaPredicted RBP12□□□□□ -0.49
LRIF1-202ENST00000485275 OMGP23515 440 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 PDLIM4P50479 330 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 ERVFRD-1P60508 538 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 GNMTQ14749 295 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 WDR25Q64LD2 544 aaPredicted RBP12□□□□□ -0.49
LRIF1-202ENST00000485275 Q6ZNX1 250 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 SPICQ8N5J4 248 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 OR4A4PQ8NGN8 299 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 RFESDQ8TAC1 157 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
LRIF1-202ENST00000485275 FXYD6Q9H0Q3 95 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 DPAGT1Q9H3H5 408 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 NCOR1P1Q9H4R4 102 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 PATZ1Q9HBE1 687 aaKnown RBP12□□□□□ -0.49
LRIF1-202ENST00000485275 NAV2Q8IVL1 2488 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 TRAV6A0A075B6T7 132 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 C22orf46C9J442 243 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 PHF1O43189 567 aaPredicted RBP12□□□□□ -0.49
LRIF1-202ENST00000485275 MMP23AO75900 390 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 NDUFB6O95139 128 aa12□□□□□ -0.49
LRIF1-202ENST00000485275 IGHV2-5P01817 119 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms