RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	CCDC144NL	Q6NUI1	221 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	ZNF497	Q6ZNH5	498 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	JAGN1	Q8N5M9	183 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	OR10A7	Q8NGE5	316 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	NRG4	Q8WWG1	115 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	SGCD	Q92629	289 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	TOMM40L	Q969M1	308 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596	S100A13	Q99584	98 aa		11.98	□□□□□ -0.49
CCNL1-222	ENST00000479596		A0A1W2PPE3	182 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596		G3V4G9	280 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	MT-ND4	P03905	459 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	CDK1	P06493	297 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	ARHGDIB	P52566	201 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	ABCA11P	Q4W5N1	156 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	TCTEX1D4	Q5JR98	221 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	ATAD3C	Q5T2N8	411 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	SLC16A12	Q6ZSM3	486 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	NDUFA11	Q86Y39	141 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	CDH26	Q8IXH8	852 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	DRAM1	Q8N682	238 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	TMEM104	Q8NE00	496 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	OR56B4	Q8NH76	319 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	UBALD1	Q8TB05	177 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	RPE	Q96AT9	228 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	AKR1E2	Q96JD6	320 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	DCLRE1B	Q9H816	532 aa		11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	LSM2	Q9Y333	95 aa	Known RBP	11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.97	□□□□□ -0.49
CCNL1-222	ENST00000479596	PEX14	O75381	377 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	LPL	P06858	475 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	SNRNP70	P08621	437 aa	Known RBP	11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	GZMH	P20718	246 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	MNDA	P41218	407 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	AQP4	P55087	323 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	LOXL3	P58215	753 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	CD83	Q01151	205 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	MADCAM1	Q13477	382 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	GPR176	Q14439	515 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	C6orf141	Q5SZD1	244 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	FAM27D1	Q5T7N8	215 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	SAMD5	Q5TGI4	173 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	AWAT2	Q6E213	333 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	SIGIRR	Q6IA17	410 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	THNSL2	Q86YJ6	484 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	GAPT	Q8N292	157 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	CCDC107	Q8WV48	283 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	CAPSL	Q8WWF8	208 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	MRPS24	Q96EL2	167 aa	Known RBP	11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	VCX	Q9H320	206 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	BANF2	Q9H503	90 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	PCDHB16	Q9NRJ7	776 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596	ERGIC3	Q9Y282	383 aa		11.96	□□□□□ -0.49
CCNL1-222	ENST00000479596		H3BUI4	141 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	ORC5	O43913	435 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	MGMT	P16455	207 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	VHL	P40337	213 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	IRF3	Q14653	427 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	BEAN1	Q3B7T3	259 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	RAB12	Q6IQ22	244 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	C10orf99	Q6UWK7	81 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	UNQ9370/PRO34162	Q6UXP9	181 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	NKAIN3	Q8N8D7	197 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR5AU1	Q8NGC0	362 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR52M1	Q8NGK5	317 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	ARL11	Q969Q4	196 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596		Q96M66	194 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	MND1	Q9BWT6	205 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	SPACA1	Q9HBV2	294 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	GFOD1	Q9NXC2	390 aa		11.95	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGHV3-43	A0A0B4J1X8	118 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	C12orf77	C9JDV5	145 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	PTGES3L	E9PB15	166 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	AIP	O00170	330 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	SDCBP	O00560	298 aa	Predicted RBP	11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	SC5D	O75845	299 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	FAM106CP	P0CH98	169 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	IGHV3-43D	P0DP04	118 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	MAPK3	P27361	379 aa	Predicted RBP	11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	RAB7A	P51149	207 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	GABPB1	Q06547	395 aa	Predicted RBP	11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	ACSM3	Q53FZ2	586 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	KPRP	Q5T749	579 aa	Predicted RBP	11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	LRRTM1	Q86UE6	522 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	LINC00311	Q8N616	119 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	C8orf31	Q8N9H6	132 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	OR10X1	Q8NGY0	326 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	NEK7	Q8TDX7	302 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	UQCC2	Q9BRT2	126 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	SELENOI	Q9C0D9	397 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	MOB4	Q9Y3A3	225 aa		11.94	□□□□□ -0.5
CCNL1-222	ENST00000479596	PLXNB1	O43157	2135 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	FAM90A10P	A6NDY2	464 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	FAM90A7P	A6NKC0	464 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	FAM90A23P	A8MXZ1	464 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	MCRIP1	C9JLW8	97 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	HSD17B6	O14756	317 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	SLC31A2	O15432	143 aa		11.93	□□□□□ -0.5
CCNL1-222	ENST00000479596	CRTAP	O75718	401 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms