RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TRAV24A0A0B4J272 114 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 A8MZ25 164 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 IFNA6P05013 189 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 ISG15P05161 165 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 MYF6P23409 242 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 SLURP1P55000 103 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 PITPNAQ00169 270 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
DDX56-210ENST00000479440 OR13C3Q8NGS6 347 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 CANT1Q8WVQ1 401 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 ARPC1AQ92747 370 aa12.45□□□□□ -0.42
DDX56-210ENST00000479440 CPNE2Q96FN4 548 aaPredicted RBP12.45□□□□□ -0.42
DDX56-210ENST00000479440 NR1H4Q96RI1 486 aaPredicted RBP12.45□□□□□ -0.42
DDX56-210ENST00000479440 AQP12BA6NM10 295 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 B2RBV5 119 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
DDX56-210ENST00000479440 HSPA12AO43301 675 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 IGLV1-40P01703 118 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 SLC2A2P11168 524 aaPredicted RBP12.44□□□□□ -0.42
DDX56-210ENST00000479440 ATP6V1E1P36543 226 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 EFNB1P98172 346 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 GALEQ14376 348 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 MMDQ15546 238 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 C12orf73Q69YU5 71 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 AQP12AQ8IXF9 295 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 OR52M1Q8NGK5 317 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 OR2G2Q8NGZ5 317 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 IL17DQ8TAD2 202 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 NRBF2Q96F24 287 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 OR4C12Q96R67 309 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 IL4I1Q96RQ9 567 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 ZCCHC4Q9H5U6 513 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 MED4Q9NPJ6 270 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 C19orf73Q9NVV2 129 aa12.44□□□□□ -0.42
DDX56-210ENST00000479440 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 ZAR1LA6NP61 321 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 GZMHP20718 246 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 RAB9AP51151 201 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 F2RL1P55085 397 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 Q3ZCU0 254 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 TP53I3Q53FA7 332 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 ELP2Q6IA86 826 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 FAM53AQ6NSI3 398 aaPredicted RBP12.43□□□□□ -0.42
DDX56-210ENST00000479440 PARP11Q9NR21 331 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 GFOD1Q9NXC2 390 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 ARL2BPQ9Y2Y0 163 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
DDX56-210ENST00000479440 TMEM30CPA0ZSE6 113 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 MAGEA13PA6NCF6 341 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
DDX56-210ENST00000479440 G3V318 75 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 SULT1B1O43704 296 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 LGALS1P09382 135 aaKnown RBP12.42□□□□□ -0.42
DDX56-210ENST00000479440 DAPP51397 102 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 KISS1Q15726 138 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 ZNF691Q5VV52 312 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 DPCDQ9BVM2 203 aaPredicted RBP12.42□□□□□ -0.42
DDX56-210ENST00000479440 ALX4Q9H161 411 aaPredicted RBP12.42□□□□□ -0.42
DDX56-210ENST00000479440 FRRS1LQ9P0K9 344 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 STUB1Q9UNE7 303 aa12.42□□□□□ -0.42
DDX56-210ENST00000479440 SORL1Q92673 2214 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 HLA-DRB1P01911 266 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 ZNF137PP52743 207 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 ZNF85Q03923 595 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 ZSCAN26Q16670 478 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
DDX56-210ENST00000479440 PXT1Q8NFP0 134 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 OR51A4Q8NGJ6 313 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 OR10AC1Q8NH08 325 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 RNF166Q96A37 237 aaPredicted RBP12.41□□□□□ -0.42
DDX56-210ENST00000479440 ELOVL1Q9BW60 279 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 TOLLIPQ9H0E2 274 aa12.41□□□□□ -0.42
DDX56-210ENST00000479440 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 IGHV4OR15-8A0A075B7B6 117 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 A0A087WW49 117 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 FKBP6O75344 327 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
DDX56-210ENST00000479440 HTR1AP08908 422 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 CCR9P51686 369 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 TMED1Q13445 227 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 LSAMPQ13449 338 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 PIGYQ3MUY2 71 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 Q8N1Y9 231 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 FLYWCH2Q96CP2 140 aaKnown RBP12.4□□□□□ -0.42
DDX56-210ENST00000479440 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 FAM192AQ9GZU8 254 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 CST11Q9H112 138 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 RAB9BQ9NP90 201 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
DDX56-210ENST00000479440 IGHV3-43A0A0B4J1X8 118 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms