RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 EREGO14944 169 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF737O75373 536 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 CD55P08174 381 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 CD38P28907 300 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 MDH2P40926 338 aaKnown RBP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 PRSS12P56730 875 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 ERVS71-1P61550 626 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 MRPL41Q8IXM3 137 aaKnown RBP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 OR1F12Q8NHA8 337 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 PINX1Q96BK5 328 aaKnown RBP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 RBM14Q96PK6 669 aaKnown RBP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 GPHA2Q96T91 129 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 CCL28Q9NRJ3 127 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF391Q9UJN7 358 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 CDH23Q9H251 3354 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 CHD9Q3L8U1 2897 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 MAP1LC3B2A6NCE7 125 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 M0R143 59 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 IL18BPO95998 194 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 PMS2P11Q13670 270 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 P2RY6Q15077 328 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 SRSF7Q16629 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM41BQ5BJD5 291 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 OR51G1Q8NGK1 321 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 PIGCQ92535 297 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 MAP1LC3BQ9GZQ8 125 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 RBKSQ9H477 322 aa11.78□□□□□ -0.52
PTPRE-204ENST00000455661 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 TNFSF12O43508 249 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 SYNGR3O43761 229 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 PIAS2O75928 621 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 CTXN2P0C2S0 81 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 SLC25A6P12236 298 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 PAX5Q02548 391 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 ZNF774Q6NX45 483 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 RLN3Q8WXF3 142 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 TECTBQ96PL2 329 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 ATG101Q9BSB4 218 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 PPP1R14DQ9NXH3 145 aa11.77□□□□□ -0.52
PTPRE-204ENST00000455661 IGKV1D-13A0A0B4J2D9 117 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 KBTBD11O94819 623 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 SCTP09683 121 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 IGKV1-13P0DP09 117 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 RAB4AP20338 218 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 G0S2P27469 103 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 HBG1P69891 147 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 HBG2P69892 147 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 CFHR1Q03591 330 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 DEFB119Q8N690 84 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 FADS6Q8N9I5 356 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 PLK3Q9H4B4 646 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 RTTNQ86VV8 2226 aa11.77□□□□□ -0.53
PTPRE-204ENST00000455661 KIR2DS1A0A191URI9 304 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A10PA6NDY2 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A18PA6NE21 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A16PA6NEW6 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A20PA6NIJ5 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A8PA6NJQ4 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A7PA6NKC0 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A22PA8MWA6 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A12PA8MX19 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A5PA8MXJ8 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A23PA8MXZ1 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
PTPRE-204ENST00000455661 HRASP01112 189 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 SERPINE2P07093 398 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A15PP0C7V4 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A13PP0C7W8 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A14PP0C7W9 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 FAM90A24PP0C7X0 464 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 KIR2DS4P43632 304 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 HNRNPKP61978 463 aaKnown RBP eCLIP11.76□□□□□ -0.53
PTPRE-204ENST00000455661 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 RHBDD2Q6NTF9 364 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 KMT5CQ86Y97 462 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 ZNF611Q8N823 705 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 TMEM37Q8WXS4 190 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 LHX4Q969G2 390 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 ANAPC16Q96DE5 110 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
PTPRE-204ENST00000455661 PCGF1Q9BSM1 259 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 OR51I2Q9H344 312 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 SLC39A9Q9NUM3 307 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 PSENENQ9NZ42 101 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 IGLV3-12A0A075B6K2 115 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 A0A1W2PPQ1 181 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 TUSC2O75896 110 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 GZMHP20718 246 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 F2RP25116 425 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 CLDN15P56746 228 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 ERVFC1-1P60608 527 aa11.76□□□□□ -0.53
PTPRE-204ENST00000455661 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
PTPRE-204ENST00000455661 RNPS1Q15287 305 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms