RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-203ENST00000430038 H3BUI4 141 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 SLC31A2O15432 143 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 GPX5O75715 221 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 MT-ND4P03905 459 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 PF4V1P10720 104 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 VHLP40337 213 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 MADCAM1Q13477 382 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 EBI3Q14213 229 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 SLC22A6Q4U2R8 563 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
CPSF4-203ENST00000430038 TRBV5-7A0A0A0MS05 114 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 IGHV1-3A0A0C4DH29 117 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 WI2-2373I1.2A0A1W2PRP0 233 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 PSMB11A5LHX3 300 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 CD2P06729 351 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 GNAO1P09471 354 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 TMEM11P17152 192 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 KCNJ3P48549 501 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 ARHGDIBP52566 201 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF134P52741 427 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 HES1Q14469 280 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 ATAD3CQ5T2N8 411 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 TMPRSS11AQ6ZMR5 421 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF497Q6ZNH5 498 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 C10orf67Q8IYJ2 551 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 Q8N6K4 173 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 OR10A7Q8NGE5 316 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 HAVCR2Q8TDQ0 301 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 CYGBQ8WWM9 190 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 TMEM80Q96HE8 168 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 RDH12Q96NR8 316 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 OR14A2Q96R54 314 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 PLSCR3Q9NRY6 295 aa13.49□□□□□ -0.25
CPSF4-203ENST00000430038 AMMECR1Q9Y4X0 333 aaPredicted RBP13.49□□□□□ -0.25
CPSF4-203ENST00000430038 PNMA8CA0A1B0GUJ8 204 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 M0QZK8 103 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 HSD17B6O14756 317 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 MPIG6BO95866 241 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 GZMHP20718 246 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 RAB7AP51149 207 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF816Q0VGE8 651 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-203ENST00000430038 ST3GAL4Q11206 333 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 RIPK1Q13546 671 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 Q499Y3 187 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 SIGIRRQ6IA17 410 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 SLC16A12Q6ZSM3 486 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 MRPL41Q8IXM3 137 aaKnown RBP13.48□□□□□ -0.25
CPSF4-203ENST00000430038 OR8H3Q8N146 312 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 TMEM104Q8NE00 496 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 OR4X2Q8NGF9 303 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 MUL1Q969V5 352 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 EAF1Q96JC9 268 aaPredicted RBP13.48□□□□□ -0.25
CPSF4-203ENST00000430038 GFOD1Q9NXC2 390 aa13.48□□□□□ -0.25
CPSF4-203ENST00000430038 EXOSC1Q9Y3B2 195 aaKnown RBP13.48□□□□□ -0.25
CPSF4-203ENST00000430038 TMEM30CPA0ZSE6 113 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 IGHG2P01859 326 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 PF4P02776 101 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 CSTBP04080 98 aaKnown RBP13.47□□□□□ -0.25
CPSF4-203ENST00000430038 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-203ENST00000430038 GP2P55259 537 aaKnown RBP13.47□□□□□ -0.25
CPSF4-203ENST00000430038 PPP3R1P63098 170 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 INSL4Q14641 139 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 LINC00311Q8N616 119 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 ZNF439Q8NDP4 499 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 OR10X1Q8NGY0 326 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 OR4K15Q8NH41 348 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 CPNE2Q96FN4 548 aaPredicted RBP13.47□□□□□ -0.25
CPSF4-203ENST00000430038 BANF2Q9H503 90 aa13.47□□□□□ -0.25
CPSF4-203ENST00000430038 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
CPSF4-203ENST00000430038 C12orf77C9JDV5 145 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 CCRL2O00421 344 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 EBAG9O00559 213 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 SDCBPO00560 298 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-203ENST00000430038 FGF16O43320 207 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 FSTP19883 344 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 THBS3P49746 956 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 RPL23AP62750 156 aaKnown RBP13.46□□□□□ -0.25
CPSF4-203ENST00000430038 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 CT45A1Q5HYN5 189 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 GLIPR1L1Q6UWM5 242 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 LCNL1Q6ZST4 164 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 C8orf86Q6ZUL3 223 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 OR2W3Q7Z3T1 314 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 MOB3BQ86TA1 216 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 GAPTQ8N292 157 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 Q8N9W7 124 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 OR52M1Q8NGK5 317 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 OR1L1Q8NH94 360 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 CT45A3Q8NHU0 189 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 PCDHB16Q9NRJ7 776 aa13.46□□□□□ -0.25
CPSF4-203ENST00000430038 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.46□□□□□ -0.25
CPSF4-203ENST00000430038 ORC5O43913 435 aa13.45□□□□□ -0.26
CPSF4-203ENST00000430038 MAS1P04201 325 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms