RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TMEM210A6NLX4 147 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PMS2P5A8MQ11 134 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 A8MXE2 369 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 IQCF6A8MYZ5 107 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF736B4DX44 427 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 DISC1C4P0D8 188 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 USP17L23D6RBM5 183 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 INMT-MINDY4F8WBC2 141 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 H7C417 338 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 J3QT63 122 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CCL21O00585 134 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PLA2G10O15496 165 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 LANCL1O43813 399 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR7C1O76099 320 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 RAB3DO95716 219 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 IGLV1-44P01699 117 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 IFNA6P05013 189 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 FCER2P06734 321 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CD37P11049 281 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 HIST1H1DP16402 221 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 GNB3P16520 340 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRKACAP17612 351 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 BCL3P20749 454 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CA6P23280 308 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 GIFP27352 417 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CALCRP30988 508 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CBX5P45973 191 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 HAAOP46952 286 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 GPM6AP51674 278 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 RBM11P57052 281 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 NAAAQ02083 359 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 MZT1Q08AG7 82 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PDZK1IP1Q13113 114 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 TNK1Q13470 666 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 LY6DQ14210 128 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 MEF2DQ14814 521 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PNLIPRP3Q17RR3 467 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACTBL2Q562R1 376 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 RNASE10Q5GAN6 216 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ATAD3CQ5T2N8 411 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1QTNF12Q5T7M4 302 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAAP20Q6NZ36 180 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 STEAP1BQ6NZ63 245 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CFAP161Q6P656 301 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 HAGHLQ6PII5 290 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 FBXW12Q6X9E4 464 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PQLC2Q6ZP29 291 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC25A26Q70HW3 274 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF554Q86TJ5 538 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 AKAP14Q86UN6 197 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 LYPD6Q86Y78 171 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF573Q86YE8 665 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SAXO1Q8IYX7 474 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 BATF2Q8N1L9 274 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OSR2Q8N2R0 312 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZSCAN4Q8NAM6 433 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM229BQ8NBD8 167 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM104Q8NE00 496 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR10V1Q8NGI7 309 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5A2Q8NGI9 324 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR4C16Q8NGL9 310 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR51F2Q8NH61 342 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 KLF14Q8TD94 323 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 NEK7Q8TDX7 302 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 GPX8Q8TED1 209 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 HPSE2Q8WWQ2 592 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 DEDD2Q8WXF8 326 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 EMG1Q92979 244 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLAMF9Q96A28 289 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CREB3L1Q96BA8 519 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 MRPS24Q96EL2 167 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 GRAMD2BQ96HH9 432 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1orf147Q96MC9 270 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF75AQ96N20 296 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CMSS1Q9BQ75 279 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 TM2D1Q9BX74 207 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CACNG6Q9BXT2 260 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PKIBQ9C010 78 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 C20orf85Q9H1P6 137 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PLK3Q9H4B4 646 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SEBOXQ9HB31 216 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 CHMP1AQ9HD42 196 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 HRASLSQ9HDD0 168 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 NUDT15Q9NV35 164 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF701Q9NV72 531 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PLEKHJ1Q9NW61 149 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 IL36GQ9NZH8 169 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 KLK11Q9UBX7 282 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 MTFP1Q9UDX5 166 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 SCP2D1Q9UJQ7 156 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PURGQ9UJV8 347 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 FZR1Q9UM11 496 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 PLEKHA6Q9Y2H5 1048 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 MEMO1Q9Y316 297 aa3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 RBMX2Q9Y388 322 aaKnown RBP3.17□□□□□ -1.9
HMGB3P20-201ENST00000417997 NUBP2Q9Y5Y2 271 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms