RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 IGLV3-19P01714 112 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC35G6P0C7Q6 338 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PIPP12273 146 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 UGT2B7P16662 529 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 GABRG2P18507 467 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ELK1P19419 428 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 RAB4AP20338 218 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 MAGP20916 626 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 GADD45AP24522 165 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 BMI1P35226 326 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 MAS1LP35410 378 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 IFNGR2P38484 337 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 RFC3P40938 356 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SERPINB10P48595 397 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 UBE2AP49459 152 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 RGS6P49758 472 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 NCS1P62166 190 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 LSM3P62310 102 aaKnown RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 CDK5Q00535 292 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 REG3AQ06141 175 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 GINS1Q14691 196 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF846Q147U1 533 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 CHRFAM7AQ494W8 412 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 DEFB134Q4QY38 66 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 C16orf87Q6PH81 154 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 LYPD2Q6UXB3 125 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 LINC00173Q6ZV60 143 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OLIG3Q7RTU3 272 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF429Q86V71 674 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 LRRC25Q8N386 305 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 CHST4Q8NCG5 386 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 MORN4Q8NDC4 146 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR4K5Q8NGD3 323 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR10G4Q8NGN3 311 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR6Q1Q8NGQ2 317 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR9A2Q8NGT5 310 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 GNPDA2Q8TDQ7 276 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 KIAA1143Q96AT1 154 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 APH1AQ96BI3 265 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PPP1R14BQ96C90 147 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZHX1-C8orf76Q96EF9 292 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR7D2Q96RA2 312 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC25A2Q9BXI2 301 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLIRPQ9GZT3 109 aaKnown RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC38A1Q9H2H9 487 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 BEX1Q9HBH7 125 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ANKHQ9HCJ1 492 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 HMG20AQ9NP66 347 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM9BQ9NQ34 198 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 FAIMQ9NVQ4 179 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 ERGIC3Q9Y282 383 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 F11RQ9Y624 299 aaKnown RBP3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 SLC22A7Q9Y694 548 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PTPRSQ13332 1948 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 PLXNB3Q9ULL4 1909 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 BRCA2P51587 3418 aa3.26□□□□□ -1.89
HMGB3P18-201ENST00000406327 GBF1Q92538 1859 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 IGLV11-55A0A075B6I3 123 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 A0A087WUU8 490 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 A6NDX4 124 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OR5K4A6NMS3 321 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 PRAMEF26H0Y7S4 382 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 H3BN98 237 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 CCRL2O00421 344 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TRAF3IP2O43734 574 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 SOX14O95416 240 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 GPR75O95800 540 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 CSTAP01040 98 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ADRA2AP08913 450 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 IFI6P09912 130 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OCM2P0CE71 109 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OCMP0CE72 109 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 CPMP14384 443 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF17P17021 662 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RCC1P18754 421 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 PMCHP20382 165 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TGFBR1P36897 503 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 OMPP47874 163 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ETV1P50549 477 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 UBE2IP63279 158 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 IFITM3Q01628 133 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TSPAN31Q12999 210 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 GGTLC2Q14390 218 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 PSG5Q15238 335 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RGS21Q2M5E4 152 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RPEL1Q2QD12 228 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ARHGAP11BQ3KRB8 267 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ZNF404Q494X3 552 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TRMT12Q53H54 448 aaKnown RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 TMEM31Q5JXX7 168 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 AADACL4Q5VUY2 407 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 CASP12Q6UXS9 341 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 NPSR1Q6W5P4 371 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 RASSF6Q6ZTQ3 369 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 ABHD12BQ7Z5M8 362 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 HMGN2P46Q86SG4 172 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 PRSS58Q8IYP2 241 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 VKORC1L1Q8N0U8 176 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 Q8N9W7 124 aa3.25□□□□□ -1.89
HMGB3P18-201ENST00000406327 DRAXINQ8NBI3 349 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms