RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF735P0CB33 412 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 NDUFB7P17568 137 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 ECI1P42126 302 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 GLP1RP43220 463 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 DSCR9P59020 149 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 RBMS2Q15434 407 aaKnown RBP11.39□□□□□ -0.59
VAPB-202ENST00000395802 FAM216BQ8N7L0 139 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 OR8B3Q8NGG8 313 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 OR6F1Q8NGZ6 308 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 COQ2Q96H96 371 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 SCGB3A2Q96PL1 93 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 OR8B2Q96RD0 313 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 EHFQ9NZC4 300 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 KIF25Q9UIL4 384 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
VAPB-202ENST00000395802 TRGV10A0A0A0MS01 117 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 hADV38S2A0JD32 116 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 C7orf66A4D0T2 115 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 SPINT2O43291 252 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 LY6HO94772 140 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 DHFRP00374 187 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 OR5H8P0DN80 308 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 RPS2P15880 293 aaKnown RBP11.39□□□□□ -0.59
VAPB-202ENST00000395802 HLA-DRB3P79483 266 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
VAPB-202ENST00000395802 CCDC107Q8WV48 283 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 MAFIPQ8WZ33 124 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 GALMQ96C23 342 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 GSX2Q9BZM3 304 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 FLVCR2Q9UPI3 526 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 USF3Q68DE3 2245 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 A0A1W2PPH5 198 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 CEACAM18A8MTB9 384 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 PEX14O75381 377 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 IGHV4-39P01824 125 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 HNRNPCP07910 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
VAPB-202ENST00000395802 TRAPPC2P0DI81 140 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 TRAPPC2BP0DI82 140 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 RCC1P18754 421 aaPredicted RBP11.38□□□□□ -0.59
VAPB-202ENST00000395802 GLIPR1P48060 266 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 CR1LQ2VPA4 569 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 SCGB2B2Q4G0G5 96 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 CLEC2AQ6UVW9 174 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 IDO2Q6ZQW0 420 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 AKAP14Q86UN6 197 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 OR10J5Q8NHC4 309 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 NEIL1Q96FI4 390 aaPredicted RBP11.38□□□□□ -0.59
VAPB-202ENST00000395802 PIMREGQ9BSJ6 248 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 DOPEY2Q9Y3R5 2298 aa11.38□□□□□ -0.59
VAPB-202ENST00000395802 TRBV23-1A0A0A0MS06 115 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 A0A0A6YYJ9 748 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 BOLA2-SMG1P6H3BVE0 249 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 DVL1O14640 695 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 ARPC1BO15143 372 aaKnown RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 TFF1P04155 84 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 GSTT2P0CG29 244 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 DNASE1P24855 282 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 SEC61A1P61619 476 aaKnown RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 TMEM30BQ3MIR4 351 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 AVPI1Q5T686 147 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 TERB2Q8NHR7 220 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 FAM168AQ92567 244 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 NINJ1Q92982 152 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 SLC6A7Q99884 636 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 GINS4Q9BRT9 223 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 GHITMQ9H3K2 345 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 TAF9BQ9HBM6 251 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 UBE2J1Q9Y385 318 aaPredicted RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 HMX3A6NHT5 357 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 NDUFS7O75251 213 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 ZBTB25P24278 435 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 IL2RGP31785 369 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 RBMXP38159 391 aaKnown RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 RPL31P62899 125 aaKnown RBP11.37□□□□□ -0.59
VAPB-202ENST00000395802 HMGN3Q15651 99 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 ZNF525Q8N782 197 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 GIMAP1Q8WWP7 306 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 GAL3ST2Q9H3Q3 398 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 SLC23A1Q9UHI7 598 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
VAPB-202ENST00000395802 AKAP6Q13023 2319 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 HSPA12AO43301 675 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 HEXAP06865 529 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 SCTP09683 121 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 SURF2Q15527 256 aaPredicted RBP11.36□□□□□ -0.59
VAPB-202ENST00000395802 CD276Q5ZPR3 534 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 PRR18Q8N4B5 295 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 MRGPRDQ8TDS7 321 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 IL1F10Q8WWZ1 152 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 CORO2AQ92828 525 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 RAB39BQ96DA2 213 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
VAPB-202ENST00000395802 PATZ1Q9HBE1 687 aaKnown RBP11.36□□□□□ -0.59
VAPB-202ENST00000395802 TAS2R3Q9NYW6 316 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms