RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZNF728P0DKX0 622 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 LMO1P25800 156 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 DUSP1P28562 367 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 MZT1Q08AG7 82 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 SLC38A6Q8IZM9 456 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 C14orf79Q96F83 325 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 RSRP1Q9BUV0 290 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CHMP1AQ9HD42 196 aaPredicted RBP12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CSMD1Q96PZ7 3565 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 VPS13CQ709C8 3753 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 TRBV6-7A0A0A0MS04 114 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 NPIPB11E5RHQ5 1161 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CCSO14618 274 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 DEGS1O15121 323 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 PPYP01298 95 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CD200P41217 278 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 KCNJ3P48549 501 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
SCAF11-204ENST00000395454 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 CABLES2Q9BTV7 478 aa12.7□□□□□ -0.38
SCAF11-204ENST00000395454 L7N2F9 121 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 NXPH2O95156 264 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 DIRAS3O95661 229 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 OR2H2O95918 312 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 IFNA2P01563 188 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 SSTR2P30874 369 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 CFHR2P36980 270 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 IL15RAQ13261 267 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF345Q14585 488 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 IGSF11Q5DX21 431 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 WDR82Q6UXN9 313 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF497Q6ZNH5 498 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 LRTM2Q8N967 370 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 SEBOXQ9HB31 216 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-204ENST00000395454 TMEM165Q9HC07 324 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 DSCAMO60469 2012 aa12.69□□□□□ -0.38
SCAF11-204ENST00000395454 IGKV1-6A0A0C4DH72 117 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 ARPC5O15511 151 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 TK1P04183 234 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 AADACP22760 399 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 S100A11P31949 105 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 PIGPP57054 158 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 OPCMLQ14982 345 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 SLC9A3R2Q15599 337 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 GSG1LQ6UXU4 331 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 KCTD9Q7L273 389 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 OR4A4PQ8NGN8 299 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 SLC2A9Q9NRM0 540 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 TAAR3PQ9P1P4 343 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 LAMP3Q9UQV4 416 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 APCP25054 2843 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 FXYD6-FXYD2A0A087WZ82 144 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 SH2D1BO14796 132 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 KNG1P01042 644 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 SOD3P08294 240 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 SCTP09683 121 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF44P15621 663 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 HLA-DRB3P79483 266 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 PAX5Q02548 391 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 FIP1L1Q6UN15 594 aaKnown RBP12.68□□□□□ -0.38
SCAF11-204ENST00000395454 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 RDH5Q92781 318 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 PDCD10Q9BUL8 212 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 NAA60Q9H7X0 242 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
SCAF11-204ENST00000395454 C1orf123Q9NWV4 160 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 TNFSF18Q9UNG2 199 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 ARFGEF3Q5TH69 2177 aa12.68□□□□□ -0.38
SCAF11-204ENST00000395454 CACNA1DQ01668 2161 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 BAHCC1Q9P281 2608 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 B9A039 149 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 HSPB6O14558 160 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 GRPP07492 148 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 RND3P61587 244 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 EFNB3Q15768 340 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
SCAF11-204ENST00000395454 ACP7Q6ZNF0 438 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 OR10Z1Q8NGY1 313 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 VRK1Q99986 396 aaPredicted RBP12.67□□□□□ -0.38
SCAF11-204ENST00000395454 MSL2Q9HCI7 577 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 RASL12Q9NYN1 266 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 COMMD9Q9P000 198 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 WIPI2Q9Y4P8 454 aa12.67□□□□□ -0.38
SCAF11-204ENST00000395454 RAI1Q7Z5J4 1906 aaPredicted RBP12.67□□□□□ -0.38
SCAF11-204ENST00000395454 ZNF205O95201 554 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 HAND1O96004 215 aa12.66□□□□□ -0.38
SCAF11-204ENST00000395454 DANCRP0C864 163 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms