RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 RAB13P51153 203 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 PRB3Q04118 309 aaPredicted RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 DYNC1I2Q13409 638 aaKnown RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 LHFPL3Q86UP9 236 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR13A1Q8NGR1 328 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 PLPPR1Q8TBJ4 325 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 EAF1Q96JC9 268 aaPredicted RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 NKX3-1Q99801 234 aaPredicted RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 ALG8Q9BVK2 526 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 DPCDQ9BVM2 203 aaPredicted RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 FAM107BQ9H098 131 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 RPL36Q9Y3U8 105 aaKnown RBP4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 U3KQK5 164 aa4.88□□□□□ -1.63
SMARCAD1-203ENST00000394961 H3BNX3 289 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 RRP9O43818 475 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 YPEL1O60688 119 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR8U8P0C7N1 319 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 GBX2P52951 348 aaPredicted RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 AESQ08117 197 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 GPR50Q13585 617 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 RBM39Q14498 530 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 BCDIN3DQ7Z5W3 292 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR5AK2Q8NH90 309 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 RGP1Q92546 391 aaPredicted RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 CCDC124Q96CT7 223 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 YPEL2Q96QA6 119 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 SULT4A1Q9BR01 284 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 UQCC2Q9BRT2 126 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 METTL9Q9H1A3 318 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TPSG1Q9NRR2 321 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PSG11Q9UQ72 335 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 DNAH1Q9P2D7 4330 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 SIRPB1O00241 398 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 DYNC1I1O14576 645 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 SPDEFO95238 335 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 MT-ND4P03905 459 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 EDDM3AQ14507 147 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TP53I3Q53FA7 332 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 YIF1BQ5BJH7 314 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 CXorf66Q5JRM2 361 aaPredicted RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 DMKNQ6E0U4 476 aaPredicted RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PYHIN1Q6K0P9 492 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 ACSM6Q6P461 480 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TRAPPC6BQ86SZ2 158 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 SUMF2Q8NBJ7 301 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 GPR148Q8TDV2 347 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PHYHIPQ92561 330 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 C4orf36Q96KX1 117 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM138Q9NPI0 162 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 DIMT1Q9UNQ2 313 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 DHDHQ9UQ10 334 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 GSTK1Q9Y2Q3 226 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 EXOSC1Q9Y3B2 195 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 CCL24O00175 119 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 FADS2O95864 444 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 MPIG6BO95866 241 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 UBBP0CG47 229 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TAS2R43P59537 309 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 GMFBP60983 142 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM95Q3KNT9 176 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF660Q6AZW8 331 aaPredicted RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF429Q86V71 674 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PACRGLQ8N7B6 248 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 NKAIN3Q8N8D7 197 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF491Q8N8L2 437 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 OR52I1Q8NGK6 324 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM106AQ96A25 262 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 PTX4Q96A99 478 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 SMIM19Q96E16 107 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 TMEM68Q96MH6 324 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 C9orf16Q9BUW7 83 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 IMPAD1Q9NX62 359 aa4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 MRPS28Q9Y2Q9 187 aaKnown RBP4.87□□□□□ -1.63
SMARCAD1-203ENST00000394961 H0YJX3 145 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 RPP14O95059 124 aaKnown RBP4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 HMGN3Q15651 99 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 PAN3Q58A45 887 aaKnown RBP4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 STMN2Q93045 179 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 CHST6Q9GZX3 395 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 PLCXD1Q9NUJ7 323 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 KIF25Q9UIL4 384 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 MGAT4AQ9UM21 535 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 OAZ3Q9UMX2 235 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 ORC6Q9Y5N6 252 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 MAGEB4O15481 346 aaPredicted RBP4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 LIMS3P0CW19 117 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 LIMS4P0CW20 117 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 FAM209BQ5JX69 171 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 BAIAP2L2Q6UXY1 529 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 MOB1BQ7L9L4 216 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 ODF3L1Q8IXM7 274 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 APH1BQ8WW43 257 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 FKBP14Q9NWM8 211 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 CD2P06729 351 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 ZNF44P15621 663 aa4.86□□□□□ -1.63
SMARCAD1-203ENST00000394961 DCKP27707 260 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms