RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 MSMO1Q15800 293 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MRGPRGQ86SM5 289 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 ARL6IP6Q8N6S5 226 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 OR10J5Q8NHC4 309 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 CLDND2Q8NHS1 167 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 C11orf94C9JXX5 98 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 HRASP01112 189 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MPZP25189 248 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 DMWDQ09019 674 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 FAM166AQ6J272 317 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 CCNL2Q96S94 520 aaPredicted RBP14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 BET1LQ9NYM9 111 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MTCH1Q9NZJ7 389 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 RPH3ALQ9UNE2 315 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 HSBP1L1C9JCN9 74 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 SEMA4FO95754 770 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MSR1P21757 451 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 Q5PR19 223 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MESP1Q9BRJ9 268 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 CTDSP1Q9GZU7 261 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 PARLQ9H300 379 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 VSIRQ9H7M9 311 aa14.78□□□□□ -0.04
TRAF3IP1-202ENST00000391993 A0A1B0GWJ7 208 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 WIPF3A6NGB9 483 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 CA11O75493 328 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 HSBP1O75506 76 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 ZNF17P17021 662 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 OTX1P32242 354 aaPredicted RBP14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 SPATA45Q537H7 98 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MRPL21Q7Z2W9 205 aaKnown RBP14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 OR10S1Q8NGN2 331 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 ASB10Q8WXI3 467 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 FAM206AQ9NX38 181 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 TDGF1P3P51864 188 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 ZNF506Q5JVG8 444 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 UHRF2Q96PU4 802 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 ALKBH3Q96Q83 286 aaPredicted RBP14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 SMDT1Q9H4I9 107 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 MOB1AQ9H8S9 216 aa14.77□□□□□ -0.04
TRAF3IP1-202ENST00000391993 SNURFLB1AK76 121 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 PITX3O75364 302 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 B4GALT1P15291 398 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 MPLP40238 635 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 IL24Q13007 206 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ZNF774Q6NX45 483 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 MRPL54Q6P161 138 aaKnown RBP14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 LINC00114Q6XXX2 140 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 Q6ZVH6 145 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 CTHRC1Q96CG8 243 aa14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 NEIL1Q96FI4 390 aaPredicted RBP14.77□□□□□ -0.05
TRAF3IP1-202ENST00000391993 XIRP2A4UGR9 3374 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 LOC102723971A0A1B0GUV8 181 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 LRP5LA4QPB2 252 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 B4E171 279 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 NDUFB4O95168 129 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 VDAC1P21796 283 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 SRSF4Q08170 494 aaKnown RBP14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 Q56UQ5 140 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 LRRC75AQ8NAA5 344 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ZNF581Q9P0T4 197 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 PLXNB2O15031 1838 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 KIR2DS5A0A0G2JLQ3 304 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 A0A0G2JNG1 304 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 KIR2DS3K7RE56 304 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 DHRS3O75911 302 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 COX5AP20674 150 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 GNB2P62879 340 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 KIR2DS5Q14953 304 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 MAJINQ3KP22 176 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 H1FOOQ8IZA3 346 aaPredicted RBP14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ZNF319Q9P2F9 582 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 A0A1B0GU03 582 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 TRDCB7Z8K6 153 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 LILRA6Q6PI73 481 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 OR1L6Q8NGR2 347 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 RCC1LQ96I51 464 aaKnown RBP14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 TP53I11O14683 189 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 PMELP40967 661 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 RELQ04864 619 aaPredicted RBP14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 TMPRSS7Q7RTY8 843 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 OR10P1Q8NGE3 313 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ST6GALNAC6Q969X2 333 aa14.76□□□□□ -0.05
TRAF3IP1-202ENST00000391993 BRCA2P51587 3418 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 FDX2Q6P4F2 183 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 SDF2L1Q9HCN8 221 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ACTL6BO94805 426 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 SHBQ15464 509 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 VASH2Q86V25 355 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 TMEM171Q8WVE6 324 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 MTCL1Q9Y4B5 1905 aaKnown RBP14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 SYNGR2O43760 224 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 SUCLG1P53597 346 aaKnown RBP14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ZNF658BQ4V348 819 aaPredicted RBP14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 PRR27Q6MZM9 219 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 S100A7AQ86SG5 101 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 ADPRHL1Q8NDY3 354 aa14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 RPP25Q9BUL9 199 aaKnown RBP14.75□□□□□ -0.05
TRAF3IP1-202ENST00000391993 GLRX2Q9NS18 164 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms