RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PMCHP20382 165 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 CLEC18BQ6UXF7 455 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 ZNF596Q8TC21 504 aa11.87□□□□□ -0.51
GPC6-201ENST00000377047 NAT2P11245 290 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 ERGP11308 486 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 NQO2P16083 231 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 RAB5AP20339 215 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 GALR1P47211 349 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 RBM14Q96PK6 669 aaKnown RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 HSBP1O75506 76 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 PARP11Q9NR21 331 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 KLHDC2Q9Y2U9 406 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 RP1L1Q8IWN7 2480 aaPredicted RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 ALX3O95076 343 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 CTSBP07858 339 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 DAOP14920 347 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 SUMO1P63165 101 aaKnown RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 IL24Q13007 206 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 MMP24Q9Y5R2 645 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 K7N7A8 449 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 ASAH2BP0C7U1 165 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 ZNF154Q13106 437 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 WSB1Q9Y6I7 421 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 VDAC1P21796 283 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 HTR1DP28221 377 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 TMEM241Q24JQ0 296 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 TEX261Q6UWH6 196 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 FAM181AQ8N9Y4 354 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 NFAM1Q8NET5 270 aaPredicted RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 HDHD3Q9BSH5 251 aaPredicted RBP11.86□□□□□ -0.51
GPC6-201ENST00000377047 MMP26Q9NRE1 261 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 U3KQ87 197 aa11.86□□□□□ -0.51
GPC6-201ENST00000377047 NEURL1O76050 574 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 LOXL3P58215 753 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 OR4X1Q8NH49 305 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 DXOO77932 396 aaKnown RBP11.85□□□□□ -0.51
GPC6-201ENST00000377047 PGA4P0DJD7 388 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 VSIG8P0DPA2 414 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 PSG2P11465 335 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 ATP5J2P56134 94 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 RBM11P57052 281 aaKnown RBP11.85□□□□□ -0.51
GPC6-201ENST00000377047 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
GPC6-201ENST00000377047 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 CEACAM21Q3KPI0 293 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 SHISA5Q8N114 240 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 CCL19Q99731 98 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 GPA33Q99795 319 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 OR51B2Q9Y5P1 312 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 CA11O75493 328 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 SLC6A1P30531 599 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 PSG5Q15238 335 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 SURF2Q15527 256 aaPredicted RBP11.85□□□□□ -0.51
GPC6-201ENST00000377047 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 TMEM18Q96B42 140 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 PTP4A3O75365 173 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 HLA-GP17693 338 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 FAM219AQ8IW50 185 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
GPC6-201ENST00000377047 C1QCP02747 245 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 MMP16P51512 607 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 OR1K1Q8NGR3 316 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 RAB29O14966 203 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 TTRP02766 147 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 GFRA1P56159 465 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 TMEM33P57088 247 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 AANATQ16613 207 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 SLC2A9Q9NRM0 540 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 IGHV3-72A0A0B4J1Y9 119 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 TO15178 435 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 NRXN2Q9P2S2 1712 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
GPC6-201ENST00000377047 A0A1W2PR77 199 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 FABP4P15090 132 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 PCOLCEQ15113 449 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 DGAT2L7PQ6IED9 249 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 P2RY1P47900 373 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 FAM222BQ8WU58 562 aa11.84□□□□□ -0.51
GPC6-201ENST00000377047 CYB5R3P00387 301 aaPredicted RBP11.83□□□□□ -0.51
GPC6-201ENST00000377047 ORM1P02763 201 aa11.83□□□□□ -0.51
GPC6-201ENST00000377047 FAM106CPP0CH98 169 aa11.83□□□□□ -0.51
GPC6-201ENST00000377047 PGLYRP3Q96LB9 341 aa11.83□□□□□ -0.51
GPC6-201ENST00000377047 J3QR06 171 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 CTDSPLO15194 276 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 ID1P41134 155 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 ZNF826PQ6ZT77 177 aa11.83□□□□□ -0.52
GPC6-201ENST00000377047 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms