RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 GMDSO60547 372 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 MTRF1O75570 445 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 CST4P01036 141 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 NRASP01111 189 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 IGHV2-70P01814 119 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 CDK1P06493 297 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 TACSTD2P09758 323 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 IGHV4-31P0DP07 118 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 PIPP12273 146 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 IRF2P14316 349 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 CCL1P22362 96 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 PMELP40967 661 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 HSPA13P48723 471 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 GPM6AP51674 278 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 GBX2P52951 348 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 BTG1P62324 171 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 MRPS11P82912 194 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 SLC3A1Q07837 685 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 LOXL1Q08397 574 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 RIPPLY1Q0D2K3 151 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 CDK5R1Q15078 307 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ZMYND11Q15326 602 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 SNCBQ16143 134 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 KRTAP13-3Q3SY46 172 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 TMPRSS11AQ6ZMR5 421 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 BATF2Q8N1L9 274 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 FTMTQ8N4E7 242 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ZNF676Q8N7Q3 588 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ZNF540Q8NDQ6 660 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 DEFB108BQ8NET1 73 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 OR1M1Q8NGA1 313 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 OR13C3Q8NGS6 347 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 OR13C5Q8NGS8 318 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 OR11L1Q8NGX0 322 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 LRRC29Q8WV35 223 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 TSEN15Q8WW01 171 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 OR5P3Q8WZ94 311 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 RGP1Q92546 391 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 RPL3LQ92901 407 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 RAB1CQ92928 201 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ADAT3Q96EY9 351 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 TIMD4Q96H15 378 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 RNF170Q96K19 258 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 PDCD1LG2Q9BQ51 273 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 RTL8AQ9BWD3 113 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 SLC22A4Q9H015 551 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 COMMD4Q9H0A8 199 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 FN3KRPQ9HA64 309 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 FKBP14Q9NWM8 211 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 CHCHD3Q9NX63 227 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 CNOT2Q9NZN8 540 aaKnown RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 ERVK-18Q9QC07 812 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ZNF69Q9UC07 566 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ENPP5Q9UJA9 477 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 CAB39Q9Y376 341 aaPredicted RBP3.56□□□□□ -1.84
PMS1-202ENST00000374826 MPC1Q9Y5U8 109 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 NPTNQ9Y639 398 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 PLXNB1O43157 2135 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 ZFHX3Q15911 3703 aa3.56□□□□□ -1.84
PMS1-202ENST00000374826 NIPBLQ6KC79 2804 aaeCLIP3.55□□□□□ -1.84
PMS1-202ENST00000374826 MXRA5Q9NR99 2828 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 AGRNO00468 2067 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 FAM230AA0A1W2PPH8 454 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 ANKRD61A6NGH8 418 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 OR5B21A6NL26 309 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 LRRC30A6NM36 301 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 TMEM212A6NML5 194 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 DHRS7CA6NNS2 312 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 CEACAM18A8MTB9 384 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 CDIPTO14735 213 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 CD5LO43866 347 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 RHBDL1O75783 438 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 GATBO75879 557 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 DUS4LO95620 317 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 PTBP3O95758 552 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 IGHV2-5P01817 119 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 MT-ND2P03891 347 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 TFF1P04155 84 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 CCDC159P0C7I6 412 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 ATP6V1B1P15313 513 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 RPS2P15880 293 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 CRHBPP24387 322 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 EEF1B2P24534 225 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 MDH2P40926 338 aaKnown RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 POU3F4P49335 361 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 WNT4P56705 351 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 TMEM33P57088 247 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 GNG3P63215 75 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 SLC35A2P78381 396 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 LCN2P80188 198 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 MZT1Q08AG7 82 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 MED21Q13503 144 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 ZNF181Q2M3W8 571 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 CLVS2Q5SYC1 327 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 TMEM244Q5VVB8 128 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 TMEM42Q69YG0 159 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 HAGHLQ6PII5 290 aaPredicted RBP3.55□□□□□ -1.84
PMS1-202ENST00000374826 LYPD2Q6UXB3 125 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 WDR82Q6UXN9 313 aa3.55□□□□□ -1.84
PMS1-202ENST00000374826 IL17RELQ6ZVW7 336 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms