RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 OR8G5Q8NG78 346 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 OR1L1Q8NH94 360 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM54Q969K7 222 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PERPQ96FX8 193 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 NXF2Q9GZY0 626 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TRAV8-7A0A075B6U6 113 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CENPVL1A0A0U1RR11 272 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 OR5H1A6NKK0 313 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 EFEMP2O95967 443 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PNRC1Q12796 327 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PDCD1Q15116 288 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ADAM5Q6NVV9 412 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 C19orf35Q6ZS72 473 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 GVQW1Q8N7I0 195 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 NHLRC2Q8NBF2 726 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 OR1L8Q8NGR8 309 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SNX22Q96L94 193 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF714Q96N38 554 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SLC7A10Q9NS82 523 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 MMP24Q9Y5R2 645 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 IGLV1-36A0A0B4J1U3 117 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SPNP16150 400 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CDC34P49427 236 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 KLF9Q13886 244 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 FAM74A3Q4VXF1 159 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CCDC71Q8IV32 467 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF561Q8N587 486 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ZNRF4Q8WWF5 429 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ABHD14BQ96IU4 210 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SLC35B3Q9H1N7 401 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 LIPGQ9Y5X9 500 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 THSD7BQ9C0I4 1608 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SCN8AQ9UQD0 1980 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 IGLV3-12A0A075B6K2 115 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 G3V3Q6 166 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CORTO00230 105 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 HLA-GP17693 338 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CSRP1P21291 193 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 P2RX3P56373 397 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SSTP61278 116 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TECRQ9NZ01 308 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 MRPS18BQ9Y676 258 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 FRMPD3Q5JV73 1810 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PTPRDP23468 1912 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 DBX1A6NMT0 343 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 HPRT1P00492 218 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 S100A4P26447 101 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 HLXQ14774 488 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 INPP5JQ15735 1006 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 GUK1Q16774 197 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 DPF1Q92782 380 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PGLYRP3Q96LB9 341 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 NARFLQ9H6Q4 476 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 YTHDF2Q9Y5A9 579 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PTGDSP41222 190 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 COX19Q49B96 90 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 CLEC18BQ6UXF7 455 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PPP1R32Q7Z5V6 425 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 GAPTQ8N292 157 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 Q8WTZ3 238 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 MIOXQ9UGB7 285 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 SF3B6Q9Y3B4 125 aaKnown RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 URGCP-MRPS24S4R325 110 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 IGKV3D-11A0A0A0MRZ8 115 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 RGS13O14921 159 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ONECUT2O95948 504 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PAX6P26367 422 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 GPR6P46095 362 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 KIAA0141Q14154 515 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-202ENST00000360093 TNXAQ16473 311 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 PIGYQ3MUY2 71 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 C1orf100Q5SVJ3 147 aa4.23□□□□□ -1.73
SCN3A-202ENST00000360093 ARID1AO14497 2285 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PRF1P14222 555 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZP3P21754 424 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 NDUFA6P56556 154 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FAM3AP98173 230 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TIMM23BQ5SRD1 257 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FNDC7Q5VTL7 733 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 Q6ZT83 130 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR10G4Q8NGN3 311 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 HARBI1Q96MB7 349 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 C20orf24Q9BUV8 137 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SMDT1Q9H4I9 107 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF586Q9NXT0 402 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 IGHV3-43A0A0B4J1X8 118 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 LOC101059948A0A1B0GTJ6 334 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 GNG7O60262 68 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 IGHV3-43DP0DP04 118 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 NANOS3P60323 173 aaKnown RBP4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PAX5Q02548 391 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 COL10A1Q03692 680 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 ZNF345Q14585 488 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 FAM122AQ96E09 287 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 TMEM204Q9BSN7 226 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 V9GYS6 101 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 SERTM2A0A1B0GWG4 89 aa4.22□□□□□ -1.73
SCN3A-202ENST00000360093 PRR19A6NJB7 356 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms