RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CDK2P24941 298 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 ARFRP1Q13795 201 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 MOGAT2Q3SYC2 334 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 HEPN1Q6WQI6 88 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 TCF23Q7RTU1 214 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF554Q86TJ5 538 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 OR10A7Q8NGE5 316 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 SETD6Q8TBK2 473 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 MRPL30Q8TCC3 161 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 DYNC2LI1Q8TCX1 351 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 DYRK2Q92630 601 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 LINC00574Q9H8X3 128 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 CALYQ9NYX4 217 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 AK3Q9UIJ7 227 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 MGAT4AQ9UM21 535 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 SESN1Q9Y6P5 492 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 IGHV3OR16-10A0A075B7F0 116 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 TRBV6-6A0A0A6YYG2 114 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 TRAV40A0A0B4J280 105 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 IGHV1-69DA0A0B4J2H0 117 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 NPIPB11E5RHQ5 1161 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 CLPXO76031 633 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 NAPSAO96009 420 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 FSHBP01225 129 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 APOA1P02647 267 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 FAM157CP0CG43 387 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 MNDAP41218 407 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 UBE2E1P51965 193 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 PITPNAQ00169 270 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 PNLIPRP3Q17RR3 467 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 C17orf58Q2M2W7 97 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 KLF17Q5JT82 389 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF782Q6ZMW2 699 aaPredicted RBP9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 MOB1BQ7L9L4 216 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 RFESDQ8TAC1 157 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 SLC25A38Q96DW6 304 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 ZMAT3Q9HA38 289 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 TAF9BQ9HBM6 251 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 C12orf4Q9NQ89 552 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 IDI2-AS1Q9NZ38 188 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 CCDC59Q9P031 241 aaKnown RBP9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 ARHGAP32A7KAX9 2087 aa9.75□□□□□ -0.85
SPTLC1-202ENST00000337841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.74□□□□□ -0.851e-8■■■■□ 22.6
SPTLC1-202ENST00000337841 DPPA5A6NC42 116 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 FAM25AB3EWG3 89 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 FAM25CB3EWG5 89 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 FAM25GB3EWG6 89 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 RNASEK-C17orf49H0YIS7 233 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 MFNGO00587 321 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 TOR1AO14656 332 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 XRCC3O43542 346 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 IGHV4-38-2P0DP08 117 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 RCC1P18754 421 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 EPHA1P21709 976 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 OMGP23515 440 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 COX7A1P24310 79 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 NFYBP25208 207 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 PRRX1P54821 245 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 LGALS4P56470 323 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 PRAMEF5Q5TYX0 476 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 HACD4Q5VWC8 232 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 RTN4RL2Q86UN3 420 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 PDZD9Q8IXQ8 264 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 ABHD12Q8N2K0 398 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 PNKDQ8N490 385 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 OR52M1Q8NGK5 317 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 SUCNR1Q9BXA5 334 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 ADAM30Q9UKF2 790 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 KCNK7Q9Y2U2 307 aa9.74□□□□□ -0.85
SPTLC1-202ENST00000337841 DOCK11Q5JSL3 2073 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 VPS13CQ709C8 3753 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 A0A1W2PRD5 423 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 A0A1W2PRF3 423 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 A0A1W2PRM7 423 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 C12orf77C9JDV5 145 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 NPFFO15130 113 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 RGS5O15539 181 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 HPGDSO60760 199 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 MMP23AO75900 390 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 IFNA2P01563 188 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 GNG2P59768 71 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 LTC4SQ16873 150 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF260Q3ZCT1 412 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 MIDNQ504T8 468 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 TMEM69Q5SWH9 247 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 OLFML2AQ68BL7 652 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF880Q6PDB4 577 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 RBMS3Q6XE24 437 aaKnown RBP9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 PRR18Q8N4B5 295 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 OR11H6Q8NGC7 330 aa9.73□□□□□ -0.85
SPTLC1-202ENST00000337841 GALMQ96C23 342 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms