RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ZNF708P17019 499 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 RPS4XP62701 263 aaKnown RBP14.08□□□□□ -0.16
NPHP3-201ENST00000337331 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-201ENST00000337331 OR4X1Q8NH49 305 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ASB5Q8WWX0 329 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 PLPPR2Q96GM1 343 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ACTR3CQ9C0K3 210 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-201ENST00000337331 PCED1AQ9H1Q7 454 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF107Q9UII5 783 aaPredicted RBP14.08□□□□□ -0.16
NPHP3-201ENST00000337331 VAX2Q9UIW0 290 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 GPR132Q9UNW8 380 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 HS3ST3B1Q9Y662 390 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 SELEP16581 610 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ZADH2Q8N4Q0 377 aa14.08□□□□□ -0.16
NPHP3-201ENST00000337331 ZIC2O95409 532 aaPredicted RBP14.07□□□□□ -0.16
NPHP3-201ENST00000337331 COX5AP20674 150 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 TDGF1P3P51864 188 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 HOGA1Q86XE5 327 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 CTDSP1Q9GZU7 261 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 C5orf66Q9H5L9 145 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 DECR2Q9NUI1 292 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 SPINK4O60575 86 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 CRISP2P16562 243 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 PMELP40967 661 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 NXPH1P58417 271 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 GTF2H5Q6ZYL4 71 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 SARAFQ96BY9 339 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 P4HTMQ9NXG6 502 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 MTCH2Q9Y6C9 303 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 ARL2-SNX15V9GYD0 113 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 SCGB2A2Q13296 93 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 HIKESHIQ53FT3 197 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 C10orf91Q5T1B1 145 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 RHBDD2Q6NTF9 364 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 ERASQ7Z444 233 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 OR8B12Q8NGG6 310 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 NAT8Q9UHE5 227 aa14.07□□□□□ -0.16
NPHP3-201ENST00000337331 SLC22A20A6NK97 555 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 LRRC30A6NM36 301 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
NPHP3-201ENST00000337331 DEDDO75618 318 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 FAM3BP58499 235 aaPredicted RBP14.06□□□□□ -0.16
NPHP3-201ENST00000337331 BPIFB3P59826 476 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 EWSR1Q01844 656 aaKnown RBP eCLIP14.06□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF718Q3SXZ3 478 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 PLA2G3Q9NZ20 509 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 NKX6-3A6NJ46 265 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CD1AP06126 327 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 UCP3P55916 312 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 GNG3P63215 75 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 ST6GALNAC3Q8NDV1 305 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF737O75373 536 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 TNFSF15O95150 251 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 IL2RAP01589 272 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 IL13RA2Q14627 380 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 GAL3ST2Q9H3Q3 398 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 MYOZ1Q9NP98 299 aaPredicted RBP14.06□□□□□ -0.16
NPHP3-201ENST00000337331 TRBV5-5A0A0J9YX44 114 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 UPK3AO75631 287 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CT45A6P0DMU7 189 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CT45A5P0DMU8 189 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CT45A7P0DMV0 189 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 BMP5P22003 454 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 KIR3DL2P43630 455 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 TFF2Q03403 129 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CT45A1Q5HYN5 189 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 CT45A3Q8NHU0 189 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 ACY3Q96HD9 319 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 TPPP3Q9BW30 176 aa14.06□□□□□ -0.16
NPHP3-201ENST00000337331 GBF1Q92538 1859 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 PDCD6O75340 191 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 HSPB1P04792 205 aaKnown RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 CEACAM1P13688 526 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 DYNLT3P51808 116 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF816Q0VGE8 651 aaPredicted RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 OR4A47Q6IF82 309 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 CISD2Q8N5K1 135 aaKnown RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 OR2I1PQ8NGU4 316 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 ADGRG7Q96K78 797 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF665Q9H7R5 613 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 TMEM210A6NLX4 147 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 DIRC3C9JPN6 131 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 J3QRE1 110 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 FOXS1O43638 330 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 VSIG8P0DPA2 414 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 UBE2G2P60604 165 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 RPS16P62249 146 aaKnown RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 RAC1P63000 192 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 EGLN1Q9GZT9 426 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 STARD10Q9Y365 291 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 PPIHO43447 177 aaKnown RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 PTPMT1Q8WUK0 201 aaPredicted RBP14.05□□□□□ -0.16
NPHP3-201ENST00000337331 ZNRF4Q8WWF5 429 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 GALMQ96C23 342 aa14.05□□□□□ -0.16
NPHP3-201ENST00000337331 CACNA1GO43497 2377 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 TDRD6O60522 2096 aaKnown RBP14.04□□□□□ -0.16
NPHP3-201ENST00000337331 OR7C2O60412 319 aa14.04□□□□□ -0.16
NPHP3-201ENST00000337331 ZNF260Q3ZCT1 412 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms