RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SUPT4H1P63272 117 aaKnown RBP5.76□□□□□ -1.49
ZNF540-201ENST00000316433 PSG9Q00887 426 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 SRSF7Q16629 238 aaKnown RBP eCLIP5.76□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM249Q2WGJ8 235 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 CBLN3Q6UW01 205 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 TRAPPC6BQ86SZ2 158 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 LHFPL1Q86WI0 220 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-201ENST00000316433 SCGB3A2Q96PL1 93 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 UHRF2Q96PU4 802 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 RTBDNQ9BSG5 229 aaPredicted RBP5.76□□□□□ -1.49
ZNF540-201ENST00000316433 C5orf66Q9H5L9 145 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF160Q9HCG1 818 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 WNT6Q9Y6F9 365 aa5.76□□□□□ -1.49
ZNF540-201ENST00000316433 CENPVL1A0A0U1RR11 272 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 OR6C6A6NF89 314 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 J3QR06 171 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 CCL16O15467 120 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF205O95201 554 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 HBE1P02100 147 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM267Q0VDI3 215 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 MSMO1Q15800 293 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 ADIRFQ15847 76 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 ACSF3Q4G176 576 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 ASPHD2Q6ICH7 369 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 CENPVQ7Z7K6 275 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 PSMF1Q92530 271 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 EAF1Q96JC9 268 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 Q96M85 177 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 C5AR2Q9P296 337 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 FBXL7Q9UJT9 491 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 PLAGL1Q9UM63 463 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 GPR132Q9UNW8 380 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 KLHDC2Q9Y2U9 406 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 NSG2Q9Y328 171 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TRAPPC1Q9Y5R8 145 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 MYOFQ9NZM1 2061 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TRAV36DV7A0A075B6V5 113 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 A0A1B0GW15 77 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 H3BMH7 237 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 K7EQM0 130 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 IGKV1D-16P01601 117 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 FBXO45P0C2W1 286 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 KRTDAPP60985 99 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 RPL15P61313 204 aaKnown RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 DEFB103AP81534 67 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 HIST3H3Q16695 136 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 LCN10Q6JVE6 187 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM123Q8N131 208 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 GVQW1Q8N7I0 195 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 OR4F17Q8NGA8 305 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 OR4F4Q96R69 305 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 SPXQ9BT56 116 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 PHF7Q9BWX1 381 aaPredicted RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 GEMIN7Q9H840 131 aaKnown RBP5.75□□□□□ -1.49
ZNF540-201ENST00000316433 CKLFQ9UBR5 152 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TUBD1Q9UJT1 453 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 VDAC3Q9Y277 283 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 R4GMQ9 66 aa5.75□□□□□ -1.49
ZNF540-201ENST00000316433 TRBV7-9A0A0J9YWB2 115 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 TMEM14DPA8MWL7 114 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 PRR32B1ATL7 298 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 RENP00797 406 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CTSEP14091 401 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 KITLGP21583 273 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF83P51522 516 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CLDN6P56747 220 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 FFAR4Q5NUL3 377 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 PHYHD1Q5SRE7 291 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 GPR157Q5UAW9 335 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CCDC144NLQ6NUI1 221 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CALHM1Q8IU99 346 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 MTURNQ8N3F0 131 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 LRTM2Q8N967 370 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CCDC71LQ8N9Z2 235 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 OR52E2Q8NGJ4 325 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 RASD2Q96D21 266 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 GPR84Q9NQS5 396 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 PXMP4Q9Y6I8 212 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 FIGNL2A6NMB9 653 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 IGKV3-11P04433 115 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 SRP14P37108 136 aaKnown RBP5.74□□□□□ -1.49
ZNF540-201ENST00000316433 LINC00310P59036 64 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 LRRC73Q5JTD7 316 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 KCTD18Q6PI47 426 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-201ENST00000316433 DPY19L4Q7Z388 723 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 NEGR1Q7Z3B1 354 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 ZNF761Q86XN6 746 aaPredicted RBP5.74□□□□□ -1.49
ZNF540-201ENST00000316433 DEFB125Q8N687 156 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 ZIC4Q8N9L1 334 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 OR51L1Q8NGJ5 315 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 MRAP2Q96G30 205 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 SAMD10Q9BYL1 202 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 OR51I2Q9H344 312 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 TXNIPQ9H3M7 391 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CALHM2Q9HA72 323 aa5.74□□□□□ -1.49
ZNF540-201ENST00000316433 CISD1Q9NZ45 108 aaKnown RBP5.74□□□□□ -1.49
ZNF540-201ENST00000316433 EHFQ9NZC4 300 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms