RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MGST3O14880 152 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 FOXH1O75593 365 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 NAPSAO96009 420 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 EIF4EP06730 217 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 HEXAP06865 529 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 PTHLHP12272 177 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 CCL3L1P16619 93 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 FUT3P21217 361 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 ERP29P30040 261 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 BLVRBP30043 206 aaPredicted RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 VEGFCP49767 419 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 P2RX3P56373 397 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 RPL31P62899 125 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 EDDM3AQ14507 147 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 KLF17Q5JT82 389 aaPredicted RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 ATAD3CQ5T2N8 411 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 CD276Q5ZPR3 534 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 FAM53AQ6NSI3 398 aaPredicted RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 FIP1L1Q6UN15 594 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 ZNF497Q6ZNH5 498 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 IL17RELQ6ZVW7 336 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 C1QL4Q86Z23 238 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 OR13A1Q8NGR1 328 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 MRPL30Q8TCC3 161 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 CHAC2Q8WUX2 184 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 RAB40AQ8WXH6 277 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 H1FXQ92522 213 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 TBX15Q96SF7 602 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 FAAP24Q9BTP7 215 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 PECRQ9BY49 303 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 NXF2Q9GZY0 626 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 RHBDL2Q9NX52 303 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 ING3Q9NXR8 418 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 CCDC59Q9P031 241 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 RSL24D1Q9UHA3 163 aaKnown RBP4.83□□□□□ -1.64
SSX3-201ENST00000298396 AK3Q9UIJ7 227 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 KIF25Q9UIL4 384 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 SPATA2Q9UM82 520 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 PEX16Q9Y5Y5 336 aa4.83□□□□□ -1.64
SSX3-201ENST00000298396 TNCP24821 2201 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 SMIM31A0A1B0GVY4 71 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 INAFM1C9JVW0 142 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 C15orf65H3BRN8 121 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ZNF701M0R085 212 aaPredicted RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 CTDSP2O14595 271 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ENSAO43768 121 aaKnown RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 SSX5O60225 188 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 HPGDSO60760 199 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ECDO95905 644 aaPredicted RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 MT-ND4P03905 459 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 PPIAL4GP0DN37 164 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 IGHV4-38-2P0DP08 117 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 GNB3P16520 340 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ZNF182P17025 639 aaPredicted RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 ELK1P19419 428 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 CDK2P24941 298 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 RORCP51449 518 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 EDDM3BP56851 147 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 SCAND1P57086 179 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 LINC00310P59036 64 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ARF6P62330 175 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 KLRD1Q13241 179 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 MADCAM1Q13477 382 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 C17orf58Q2M2W7 97 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ZNF260Q3ZCT1 412 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 KRBOX4Q5JUW0 171 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 UBE2NLQ5JXB2 153 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 DCAF12L2Q5VW00 463 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ZNF880Q6PDB4 577 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 CLEC9AQ6UXN8 241 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 GLCCI1Q86VQ1 547 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 LAX1Q8IWV1 398 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 IZUMO1Q8IYV9 350 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 FAM185AQ8N0U4 392 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 SAMD12Q8N8I0 201 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 OR5D13Q8NGL4 314 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 OR10R2Q8NGX6 335 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 UBALD1Q8TB05 177 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 CORO2AQ92828 525 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 AJUBAQ96IF1 538 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ATG5Q9H1Y0 275 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ABCG5Q9H222 651 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 NCOR1P1Q9H4R4 102 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ZMAT3Q9HA38 289 aaKnown RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 YAE1D1Q9NRH1 226 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 PCDHB16Q9NRJ7 776 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ETAA1Q9NY74 926 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ABRACLQ9P1F3 81 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 GLS2Q9UI32 602 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 HSF4Q9ULV5 492 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ETV7Q9Y603 341 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 SOX21Q9Y651 276 aaPredicted RBP4.82□□□□□ -1.64
SSX3-201ENST00000298396 LINC00312Q9Y6C7 94 aa4.82□□□□□ -1.64
SSX3-201ENST00000298396 ATRQ13535 2644 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 A0A075B6Q4 140 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 IGHV3OR16-10A0A075B7F0 116 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 IGKV1D-8A0A087WSZ0 117 aa4.81□□□□□ -1.64
SSX3-201ENST00000298396 TRBV6-6A0A0A6YYG2 114 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms