RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 BSXQ3C1V8 233 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 ABLIM2Q6H8Q1 611 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 MRGPRX3Q96LB0 322 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 ABLIM3O94929 683 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 MFAP4P55083 255 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 SPEM1Q8N4L4 309 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 F11RQ9Y624 299 aaKnown RBP10.06□□□□□ -0.8
PTPN4-201ENST00000263708 MAST2Q6P0Q8 1798 aa10.06□□□□□ -0.8
PTPN4-201ENST00000263708 SFT2D2O95562 160 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SNRPCP09234 159 aaKnown RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ASB5Q8WWX0 329 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 RAX2Q96IS3 184 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 GPA33Q99795 319 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 CA10Q9NS85 328 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 NPFFO15130 113 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 STXBP6Q8NFX7 210 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 CKS2P33552 79 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 JOSD1Q15040 202 aaPredicted RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 NCMAPQ5T1S8 102 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ALKAL1Q6UXT8 129 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 APOBEC4Q8WW27 367 aaKnown RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 MEGF10Q96KG7 1140 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SLC25A19Q9HC21 320 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SLC25A42Q86VD7 318 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 KLK15Q9H2R5 256 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ZNF665Q9H7R5 613 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 TIAM2Q8IVF5 1701 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 PMELP40967 661 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 POLR2GP62487 172 aaKnown RBP eCLIP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 DLK1P80370 383 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ZNF56Q15929 161 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 SMIM4Q8WVI0 70 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 DHRS2Q13268 280 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ANKRD37Q7Z713 158 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 FANCMQ8IYD8 2048 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 DIRC3C9JPN6 131 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 WDR38Q5JTN6 314 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 CCDC144NLQ6NUI1 221 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 Q6ZNX1 250 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 OR4A5Q8NH83 315 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 PRR13Q9NZ81 148 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 M0QZK8 103 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 GGCTO75223 188 aaKnown RBP10.05□□□□□ -0.8
PTPN4-201ENST00000263708 ANGPTL4Q9BY76 406 aa10.05□□□□□ -0.8
PTPN4-201ENST00000263708 YLPM1P49750 1951 aaKnown RBP10.04□□□□□ -0.8
PTPN4-201ENST00000263708 LRP6O75581 1613 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
PTPN4-201ENST00000263708 CD81P60033 236 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 NSUN5P2Q63ZY6 315 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 INHBBP09529 407 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 LAMTOR1Q6IAA8 161 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 STARD10Q9Y365 291 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 PDCD6O75340 191 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 SPNP16150 400 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 RAB24Q969Q5 203 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 ABHD14BQ96IU4 210 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 PRNDQ9UKY0 176 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 PGA4P0DJD7 388 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 PGA5P0DJD9 388 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 C1orf210Q8IVY1 113 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 OR10J1P30954 320 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 TMEM33P57088 247 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 EIF3IQ13347 325 aaKnown RBP10.04□□□□□ -0.8
PTPN4-201ENST00000263708 SLC35E3Q7Z769 313 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 CCL27Q9Y4X3 112 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 KBTBD11O94819 623 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 FSCN3Q9NQT6 498 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 SPICQ8N5J4 248 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 MAP6Q96JE9 813 aa10.04□□□□□ -0.8
PTPN4-201ENST00000263708 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 SLC16A13Q7RTY0 426 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 CHST1O43916 411 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 MBPP02686 304 aaPredicted RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 A0A1W2PS18 150 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 DIRC2Q96SL1 478 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 WNT5BQ9H1J7 359 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 COL16A1Q07092 1604 aaPredicted RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 RAC3P60763 192 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 ISL1P61371 349 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 B4GALNT1Q00973 533 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 AESQ08117 197 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 MDP1Q86V88 176 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 MUC20Q8N307 709 aaPredicted RBP10.03□□□□□ -0.8
PTPN4-201ENST00000263708 C2orf83Q53S99 150 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 RNF7Q9UBF6 113 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 IGKV3-20P01619 116 aa10.03□□□□□ -0.8
PTPN4-201ENST00000263708 CT55Q8WUE5 264 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms