RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 EGLN1Q9GZT9 426 aa15.22■□□□□ 0.03
VIM-201ENST00000224237 CACNA1DQ01668 2161 aa15.22■□□□□ 0.03
VIM-201ENST00000224237 HCFC1P51610 2035 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 IGKV1D-17A0A075B6S4 117 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 IGKV1-6A0A0C4DH72 117 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 B9A039 149 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 SNAPC5O75971 98 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 CLDN14O95500 239 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 PLAUP00749 431 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 H2BFSP57053 126 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 RAP2BP61225 183 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 SUPT4H1P63272 117 aaKnown RBP15.21■□□□□ 0.03
VIM-201ENST00000224237 PAX5Q02548 391 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 CLEC18BQ6UXF7 455 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 OR2T35Q8NGX2 323 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 PPP1R35Q8TAP8 253 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 FAM222BQ8WU58 562 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 MS4A5Q9H3V2 200 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 SAP30LQ9HAJ7 183 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 CISD1Q9NZ45 108 aaKnown RBP15.21■□□□□ 0.03
VIM-201ENST00000224237 PIPOXQ9P0Z9 390 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 METRNQ9UJH8 293 aa15.21■□□□□ 0.03
VIM-201ENST00000224237 TRBV6-7A0A0A0MS04 114 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 RPS2P15880 293 aaKnown RBP15.2■□□□□ 0.02
VIM-201ENST00000224237 ABCA11PQ4W5N1 156 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 LIN54Q6MZP7 749 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 OR5M8Q8NGP6 311 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 OR10J5Q8NHC4 309 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 KIRREL1Q96J84 757 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 SHARPINQ9H0F6 387 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 DYNLRB1Q9NP97 96 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 LRRC30A6NM36 301 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 DEFB108AA8MXU0 73 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 NPIPB11E5RHQ5 1161 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 ZNF737O75373 536 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 TUSC2O75896 110 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 DNASE1P24855 282 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 GABRA2P47869 451 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 PIGPP57054 158 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 AESQ08117 197 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 HMGN3Q15651 99 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 SGPP2Q8IWX5 399 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 COQ8AQ8NI60 647 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 ITLN2Q8WWU7 325 aaPredicted RBP15.2■□□□□ 0.02
VIM-201ENST00000224237 PIK3IP1Q96FE7 263 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 OPN4Q9UHM6 478 aa15.2■□□□□ 0.02
VIM-201ENST00000224237 IGHV3OR15-7A0A075B7D8 119 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 A0A0B4J2A0 478 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 CRYM-AS1A6NIL9 109 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 SIX6O95475 246 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 CYB5R3P00387 301 aaPredicted RBP15.19■□□□□ 0.02
VIM-201ENST00000224237 TFF1P04155 84 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 HLA-GP17693 338 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 CD80P33681 288 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 ZNF672Q499Z4 452 aaPredicted RBP15.19■□□□□ 0.02
VIM-201ENST00000224237 KRBOX4Q5JUW0 171 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 ZNF767PQ75MW2 155 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 OR11H4Q8NGC9 324 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 ANGPTL6Q8NI99 470 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 COQ2Q96H96 371 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 SNX22Q96L94 193 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 TMEM204Q9BSN7 226 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 RSRP1Q9BUV0 290 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 KCNIP1Q9NZI2 227 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 SHPKQ9UHJ6 478 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 KIF25Q9UIL4 384 aa15.19■□□□□ 0.02
VIM-201ENST00000224237 OOEPA6NGQ2 149 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 DBX1A6NMT0 343 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 LOXP28300 417 aaPredicted RBP15.18■□□□□ 0.02
VIM-201ENST00000224237 SNRPD2P62316 118 aaKnown RBP15.18■□□□□ 0.02
VIM-201ENST00000224237 SLC9A3R2Q15599 337 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 LY6G6FQ5SQ64 297 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 ZCCHC24Q8N2G6 241 aaKnown RBP15.18■□□□□ 0.02
VIM-201ENST00000224237 LILRB1Q8NHL6 650 aaPredicted RBP15.18■□□□□ 0.02
VIM-201ENST00000224237 IL1F10Q8WWZ1 152 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 TAF9BQ9HBM6 251 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 SLC2A9Q9NRM0 540 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 TRAV39A0A0B4J263 110 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 RGS11O94810 467 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 IFNA2P01563 188 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 MST1LQ2TV78 715 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 DCAF12L2Q5VW00 463 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 KCTD9Q7L273 389 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 PRR18Q8N4B5 295 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 CCDC71LQ8N9Z2 235 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 DYSFO75923 2080 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 ABCA4P78363 2273 aa15.18■□□□□ 0.02
VIM-201ENST00000224237 TEX13DA0A0J9YY54 714 aaPredicted RBP15.17■□□□□ 0.02
VIM-201ENST00000224237 MUC1P15941 1255 aaPredicted RBP15.17■□□□□ 0.02
VIM-201ENST00000224237 FAM201AQ5SY85 155 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 C6orf183Q5T699 404 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 TEX36Q5VZQ5 186 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 STUMQ69YW2 141 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 H1FOOQ8IZA3 346 aaPredicted RBP15.17■□□□□ 0.02
VIM-201ENST00000224237 C1orf87Q8N0U7 546 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 MUC15Q8N387 334 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 ZNF561Q8N587 486 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 ZNF565Q8N9K5 539 aa15.17■□□□□ 0.02
VIM-201ENST00000224237 RTN4IP1Q8WWV3 396 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms