RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 FAM90A18PA6NE21 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A16PA6NEW6 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A20PA6NIJ5 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A8PA6NJQ4 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A7PA6NKC0 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A22PA8MWA6 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A12PA8MX19 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A5PA8MXJ8 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A23PA8MXZ1 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A15PP0C7V4 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A13PP0C7W8 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A14PP0C7W9 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM90A24PP0C7X0 464 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 NANOS3P60323 173 aaKnown RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 HARBI1Q96MB7 349 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 ZNFX1Q9P2E3 1918 aaKnown RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 A0A1W2PQM1 296 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 FAM157AC9JC47 383 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 UBE2L3P68036 154 aaKnown RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 PNRC1Q12796 327 aaPredicted RBP20.18■□□□□ 0.82
TARBP1-201ENST00000040877 KLHDC2Q9Y2U9 406 aa20.18■□□□□ 0.82
TARBP1-201ENST00000040877 COX6A1P12074 109 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 PRDX2P32119 198 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 KLHDC1Q8N7A1 406 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 OR5R1Q8NH85 324 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 FAM103A1Q9BTL3 118 aaKnown RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 SLC25A10Q9UBX3 287 aaPredicted RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 GATCO43716 136 aaKnown RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 OPN1MWP04001 364 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 OPN1MW2P0DN77 364 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 OPN1MW3P0DN78 364 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 ZNF250P15622 560 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 SULT1A1P50225 295 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 SPINK9Q5DT21 86 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 C19orf35Q6ZS72 473 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 COA4Q9NYJ1 87 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 GPR6P46095 362 aaPredicted RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 RPL31P62899 125 aaKnown RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 FHL5Q5TD97 284 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 PDPNQ86YL7 162 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 OR1L8Q8NGR8 309 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 ORM2P19652 201 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 CLEC12BQ2HXU8 276 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 HSD17B13Q7Z5P4 300 aaPredicted RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 PGLYRP3Q96LB9 341 aa20.17■□□□□ 0.82
TARBP1-201ENST00000040877 ZMAT5Q9UDW3 170 aaKnown RBP20.17■□□□□ 0.82
TARBP1-201ENST00000040877 FABP4P15090 132 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 FGF12P61328 243 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 SCMH1Q96GD3 660 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 NOL4LQ96MY1 436 aaPredicted RBP20.16■□□□□ 0.82
TARBP1-201ENST00000040877 TRAPPC1Q9Y5R8 145 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 ISG15P05161 165 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 TRBV5-5A0A0J9YX44 114 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 ID4P47928 161 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 CSRP3P50461 194 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 MGAT2Q10469 447 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 CEBPEQ15744 281 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 ZNF596Q8TC21 504 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 OPN4Q9UHM6 478 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 RPS4XP62701 263 aaKnown RBP20.16■□□□□ 0.82
TARBP1-201ENST00000040877 VAMP3Q15836 100 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 STXBP6Q8NFX7 210 aa20.16■□□□□ 0.82
TARBP1-201ENST00000040877 CBY3A6NI87 242 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 COX5BP10606 129 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 CTSSP25774 331 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 SEZ6L2Q6UXD5 910 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 IGLV1-36A0A0B4J1U3 117 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 FOXL2P58012 376 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 MRPS18BQ9Y676 258 aaKnown RBP20.15■□□□□ 0.82
TARBP1-201ENST00000040877 DHRS7CA6NNS2 312 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 PCOLCEQ15113 449 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 SLC16A13Q7RTY0 426 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 SEMA7AO75326 666 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 OR1L1Q8NH94 360 aa20.15■□□□□ 0.82
TARBP1-201ENST00000040877 GALR1P47211 349 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 ERVFRD-1P60508 538 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 SUMO1P63165 101 aaKnown RBP20.14■□□□□ 0.82
TARBP1-201ENST00000040877 VAX1Q5SQQ9 334 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 TCTEX1D1Q8N7M0 179 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 Q8WTZ3 238 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 BLNKQ8WV28 456 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 MRPL24Q96A35 216 aaKnown RBP20.14■□□□□ 0.82
TARBP1-201ENST00000040877 TREM2Q9NZC2 230 aa20.14■□□□□ 0.82
TARBP1-201ENST00000040877 RANP62826 216 aaKnown RBP20.14■□□□□ 0.81
TARBP1-201ENST00000040877 FAM209AQ5JX71 171 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 ZNF788Q6ZQV5 615 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 GCSAMQ8N6F7 178 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 SPTA1P02549 2419 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 A0A1W2PRD5 423 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 A0A1W2PRF3 423 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 A0A1W2PRM7 423 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 NPIPB13A6NJU9 1138 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 NPIPB4C9JG80 1138 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 ACP1P24666 158 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 SPCS3P61009 180 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 AESQ08117 197 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 MOGAT2Q3SYC2 334 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 RAB29O14966 203 aa20.14■□□□□ 0.81
TARBP1-201ENST00000040877 GCM2O75603 506 aaPredicted RBP20.14■□□□□ 0.81
TARBP1-201ENST00000040877 IL11P20809 199 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms