RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Prss1Q9Z1R9 246 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 AgrnA2ASQ1 1950 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1150-ps1A0A1L1STL1 316 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp229E9PWT2 705 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr635K7N6B1 321 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Prss39O70169 367 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ppt1O88531 306 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Polr2gP62488 172 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gramd2aQ3V3G7 320 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Sdr39u1Q5M8N4 308 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Heatr6Q6P1G0 1184 aaKnown RBP11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp52Q8BJ45 724 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Acp7Q8BX37 438 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1297Q8VGE8 312 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Scrt1Q99M85 348 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Sft2d3Q9CSV6 209 aa11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 RbmxQ9WV02 391 aaKnown RBP11.8□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tex38A2A8T7 201 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm14409A2ARR8 349 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 RnlsA7RDN6 342 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cisd3B1AR13 137 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Grap2O89100 322 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 NdnP25233 325 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1477Q7TQQ7 315 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1014Q7TR95 305 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1013Q7TR96 305 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr901Q7TRD1 311 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr275Q7TS18 319 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 9130023H24RikQ8BG98 337 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Eif5a2Q8BGY2 153 aaKnown RBP11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 JkampQ8BI36 311 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Vash1Q8C1W1 375 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Entpd8Q8K0L2 497 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr812Q8VG64 310 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cpn1Q9JJN5 457 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 AtmQ62388 3066 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ctxnd2A0A1B0GQX3 59 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm6882J3KMT3 313 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 SgceO70258 437 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Upk2P38575 184 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 S1pr2P52592 352 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Eif5aP63242 154 aaKnown RBP11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cuzd1P70412 606 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ctf2P83714 204 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm10662Q3UT86 313 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gls2Q571F8 602 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1385Q7TQT1 309 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Txnl1Q8CDN6 289 aaKnown RBP11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Lgi3Q8K406 548 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr472Q8VG43 310 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr974Q8VH09 310 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Memo1Q91VH6 297 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rnf151Q9CQ29 239 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ing5Q9D8Y8 240 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Stpg4Q9DAG5 247 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zc3h8Q9JJ48 305 aaKnown RBP11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Dkkl1Q9QZL9 230 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cldn10Q9Z0S6 231 aa11.79□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr243E9PV96 316 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Igh-1aP01865 398 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gstp2P46425 210 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 NfybP63139 207 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Ascl1Q02067 231 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 CluQ06890 448 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gal3st2cQ3ULK5 396 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Pced1aQ6P1Z5 449 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Sat2Q6P8J2 170 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1026Q7TR90 307 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Crb3Q8QZT4 113 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Nt5mQ8VCE6 220 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 MpiQ924M7 423 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Nmnat3Q99JR6 245 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp869Q9DC47 529 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Twsg1Q9EP52 222 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Tas2r4Q9JKT3 297 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rab25Q9WTL2 213 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Trip12G5E870 2025 aaKnown RBP11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr548-ps1A0A1B0GSG0 314 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cldn34dA2AGU5 210 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm13547A2ARC0 163 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Zfp764E9QAP1 431 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Gm5225J3QPL3 108 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr905L7N1X5 310 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rab3dP35276 219 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 AgrpP56473 131 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Pax6P63015 422 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 SryQ05738 395 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 F13bQ07968 669 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Mrgprb2Q3KNA1 338 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Cd300lbQ3U497 209 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 PigtQ8BXQ2 582 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 BmperQ8CJ69 685 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Rab7bQ8VEA8 199 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr1240Q8VG73 314 aa11.78□□□□□ -0.52
Nup88-201ENSMUST00000035283 Olfr721-ps1A0A140T8T9 324 aa11.77□□□□□ -0.53
Nup88-201ENSMUST00000035283 Znf551B2RUI1 696 aa11.77□□□□□ -0.53
Nup88-201ENSMUST00000035283 Siva1O54926 175 aa11.77□□□□□ -0.53
Nup88-201ENSMUST00000035283 P01658 132 aa11.77□□□□□ -0.53
Nup88-201ENSMUST00000035283 Eif1P48024 113 aaKnown RBP11.77□□□□□ -0.53
Nup88-201ENSMUST00000035283 Mpzl1Q3TEW6 270 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms