RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OSR2Q8N2R0 312 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 OR11L1Q8NGX0 322 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 DYRK2Q92630 601 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 ADAMTS9Q9P2N4 1935 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 RBFOX3A6NFN3 312 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 K7N7A8 449 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 GCGP01275 180 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 AMBPP02760 352 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 LCATP04180 440 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 PNLIPP16233 465 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 LMO1P25800 156 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 MRPS34P82930 218 aaKnown RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 OR2C3Q8N628 320 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 SLC35G3Q8N808 338 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 MOB3AQ96BX8 217 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 THOC3Q96J01 351 aaKnown RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 UCN2Q96RP3 112 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 IGKV1-27A0A075B6S5 117 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 CDRT15L2A8MXV6 281 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 HSD17B6O14756 317 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 DKK1O94907 266 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 SCAF4O95104 1147 aaKnown RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 IL18BPO95998 194 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 ASCL1P50553 236 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 GAGE1Q13065 139 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 RAB35Q15286 201 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 PIGYQ3MUY2 71 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 DCAF10Q5QP82 559 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 FBXL14Q8N1E6 418 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 OR4D5Q8NGN0 318 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 OR2G3Q8NGZ4 309 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 OR14L1PQ8NHC6 308 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 BOD1Q96IK1 185 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 ADGRG7Q96K78 797 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 NIPSNAP3BQ9BS92 247 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 RIMS4Q9H426 269 aaPredicted RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 CBLN4Q9NTU7 201 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 ST3GAL6Q9Y274 331 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 NBASA2RRP1 2371 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 CDS2O95674 445 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 NRASP01111 189 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 CRYGSP22914 178 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 TSPAN7P41732 249 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 NKX2-1P43699 371 aaPredicted RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 SRPXP78539 464 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 MALLQ13021 153 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 CDCP2Q5VXM1 449 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 FOXD3Q9UJU5 478 aaPredicted RBP7.52□□□□□ -1.21
VCL-207ENST00000624354 CEP295Q9C0D2 2601 aa7.52□□□□□ -1.21
VCL-207ENST00000624354 EXPH5Q8NEV8 1989 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 SDK2Q58EX2 2172 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 FAM24AA6NFZ4 105 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 HSPA12AO43301 675 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 PDCD6O75340 191 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 RPLP1P05386 114 aaKnown RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 SRFP11831 508 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 TCN2P20062 427 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 AADACP22760 399 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 PRSS12P56730 875 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 RPP30P78346 268 aaKnown RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 ASCL4Q6XD76 172 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 RCC1LQ96I51 464 aaKnown RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 TP53RKQ96S44 253 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 ZNF442Q9H7R0 627 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 SLC7A11Q9UPY5 501 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 DCHS1Q96JQ0 3298 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 NBEAQ8NFP9 2946 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 IGKV1-12A0A0C4DH73 117 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 IGKV1D-12P01611 117 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 SRP19P09132 144 aaKnown RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 ATP6V0CP27449 155 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 HAGHQ16775 308 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 OR1F12Q8NHA8 337 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 ZNF700Q9H0M5 742 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 DKKL1Q9UK85 242 aa7.51□□□□□ -1.21
VCL-207ENST00000624354 UBE2J1Q9Y385 318 aaPredicted RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 NCOA6Q14686 2063 aaPredicted RBP7.51□□□□□ -1.21
VCL-207ENST00000624354 M0QZK8 103 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 MPPED1O15442 326 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 SYNGR3O43761 229 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 GGCTO75223 188 aaKnown RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 PPYP01298 95 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 DSCR4P56555 118 aaPredicted RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 ERVFC1-1P60608 527 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 VAMP2P63027 116 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 OR8B8Q15620 311 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ZNF774Q6NX45 483 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ZNF695Q8IW36 515 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 FAM185AQ8N0U4 392 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ZIC4Q8N9L1 334 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 ZFP62Q8NB50 900 aaPredicted RBP7.5□□□□□ -1.21
VCL-207ENST00000624354 PLEKHF2Q9H8W4 249 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 NKX2-6A6NCS4 301 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 TRDCB7Z8K6 153 aa7.5□□□□□ -1.21
VCL-207ENST00000624354 PITX3O75364 302 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms