RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	TRAPPC2L	Q9UL33	140 aa		10.77	□□□□□ -0.69
RAB8A-205	ENST00000589697	WIPI2	Q9Y4P8	454 aa		10.77	□□□□□ -0.69
RAB8A-205	ENST00000589697	C17orf100	A8MU93	164 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	PSPN	O60542	156 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	ATP6V1G1	O75348	118 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR2A4	O95047	310 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	CD55	P08174	381 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	RCC1	P18754	421 aa	Predicted RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	TNFRSF1A	P19438	455 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	AADAC	P22760	399 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	NFYA	P23511	347 aa	Predicted RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	SEC61A1	P61619	476 aa	Known RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	HOXA4	Q00056	320 aa	Predicted RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	COL10A1	Q03692	680 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	TESK1	Q15569	626 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	SPRN	Q5BIV9	151 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	LIN54	Q6MZP7	749 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	LPCAT3	Q6P1A2	487 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	ASCC1	Q8N9N2	400 aa	Known RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR2T35	Q8NGX2	323 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697		Q8TCH9	128 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR2A7	Q96R45	310 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	SEBOX	Q9HB31	216 aa	Predicted RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	GCM1	Q9NP62	436 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	RNF7	Q9UBF6	113 aa		10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697	CHD3	Q12873	2000 aa	Known RBP	10.76	□□□□□ -0.69
RAB8A-205	ENST00000589697		E7EQL1	145 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	ZNF205	O95201	554 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	SFT2D2	O95562	160 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	LHB	P01229	141 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PPY	P01298	95 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	IRF2	P14316	349 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	UCP3	P55916	312 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	TFF3	Q07654	80 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	HERPUD1	Q15011	391 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	KCNJ8	Q15842	424 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	ABCA11P	Q4W5N1	156 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	FAM209A	Q5JX71	171 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	SLC38A6	Q8IZM9	456 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	ZNF486	Q96H40	463 aa	Predicted RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	CABLES2	Q9BTV7	478 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	EGLN1	Q9GZT9	426 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	DYNLRB1	Q9NP97	96 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	MBNL3	Q9NUK0	354 aa	Known RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PAIP2B	Q9ULR5	123 aa	Known RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PCDHB10	Q9UN67	800 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PPP1R3C	Q9UQK1	317 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PLCE1	Q9P212	2302 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PSG2	P11465	335 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	DNASE1	P24855	282 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	APOBEC3A	P31941	199 aa	Predicted RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PRDX2	P32119	198 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR3A1	P47881	315 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	H2BFS	P57053	126 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	C2orf68	Q2NKX9	166 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	SLC35E4	Q6ICL7	350 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	CLEC18B	Q6UXF7	455 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	SGPP2	Q8IWX5	399 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR5M8	Q8NGP6	311 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	COQ8A	Q8NI60	647 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PIK3IP1	Q96FE7	263 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	PIPOX	Q9P0Z9	390 aa		10.75	□□□□□ -0.69
RAB8A-205	ENST00000589697	NBEA	Q8NFP9	2946 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	IGKV1D-17	A0A075B6S4	117 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	IGKV1-6	A0A0C4DH72	117 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	LRRC30	A6NM36	301 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	NPIPB11	E5RHQ5	1161 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	SIX6	O95475	246 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	GNLY	P22749	145 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	UQCRFS1	P47985	274 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	SUPT4H1	P63272	117 aa	Known RBP	10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	CCL8	P80075	99 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	SLC9A3R2	Q15599	337 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	EFNB3	Q15768	340 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	CD177	Q8N6Q3	437 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	OR10J5	Q8NHC4	309 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	PPP1R35	Q8TAP8	253 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	NEUROG1	Q92886	237 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	KIRREL1	Q96J84	757 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	SAP30L	Q9HAJ7	183 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	KCNIP1	Q9NZI2	227 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	OPN4	Q9UHM6	478 aa		10.74	□□□□□ -0.69
RAB8A-205	ENST00000589697	COL6A6	A6NMZ7	2263 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	IGHV3OR15-7	A0A075B7D8	119 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	TRBV6-7	A0A0A0MS04	114 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697		A0A0B4J2A0	478 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	CRYM-AS1	A6NIL9	109 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697		B9A039	149 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	TUSC2	O75896	110 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	IFNA2	P01563	188 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	TFF1	P04155	84 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	RPS2	P15880	293 aa	Known RBP	10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	AGA	P20933	346 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	CD80	P33681	288 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	GABRA2	P47869	451 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	PIGP	P57054	158 aa		10.73	□□□□□ -0.69
RAB8A-205	ENST00000589697	PAX5	Q02548	391 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms