RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 RPS2P15880 293 aaKnown RBP7.97□□□□□ -1.13
LINC00838-201ENST00000562956 FCGR2CP31995 323 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 C20orf204Q6ZNR8 217 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 ZNF826PQ6ZT77 177 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 MRGPRGQ86SM5 289 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 C11orf53Q8IXP5 236 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 BPIFCQ8NFQ6 507 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 SCARB1Q8WTV0 552 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 SEC22AQ96IW7 307 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 PIGMQ9H3S5 423 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 RHOFQ9HBH0 211 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 DEGS1O15121 323 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 NXPH2O95156 264 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 SFT2D2O95562 160 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 CRYAAP02489 173 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 ZNF44P15621 663 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 MEOX2P50222 304 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 ANKRD55Q3KP44 614 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 BEX5Q5H9J7 111 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 PRAMEF6Q5VXH4 476 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 Q8IYB0 196 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 GTF3AQ92664 365 aaKnown RBP7.97□□□□□ -1.13
LINC00838-201ENST00000562956 TOMM40LQ969M1 308 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 CXXC4Q9H2H0 198 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 SPACA1Q9HBV2 294 aa7.97□□□□□ -1.13
LINC00838-201ENST00000562956 RP1L1Q8IWN7 2480 aaPredicted RBP7.96□□□□□ -1.13
LINC00838-201ENST00000562956 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.96□□□□□ -1.13
LINC00838-201ENST00000562956 FAM25EA8MYX2 175 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 SCTP09683 121 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 HLA-GP17693 338 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 HOXA1P49639 335 aaPredicted RBP7.96□□□□□ -1.13
LINC00838-201ENST00000562956 FXYD4P59646 89 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 SORDQ00796 357 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 C3orf36Q3SXR2 165 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 GSG1LQ6UXU4 331 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 Q6ZS49 121 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 C1orf174Q8IYL3 243 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 MRPL30Q8TCC3 161 aaKnown RBP7.96□□□□□ -1.13
LINC00838-201ENST00000562956 DUSP13Q9UII6 198 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 C14orf166Q9Y224 244 aaKnown RBP7.96□□□□□ -1.13
LINC00838-201ENST00000562956 ARID1AO14497 2285 aa7.96□□□□□ -1.13
LINC00838-201ENST00000562956 TRAV14DV4A0A0A6YYC5 116 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 SIRPB1O00241 398 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 WNT9BO14905 357 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 OR2H2O95918 312 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 C4BPBP20851 252 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 ECI1P42126 302 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 SEC61A1P61619 476 aaKnown RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 NKX6-1P78426 367 aaPredicted RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 SRSF4Q08170 494 aaKnown RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 HFEQ30201 348 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 AKIRIN2Q53H80 203 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 LPCAT3Q6P1A2 487 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 VHLLQ6RSH7 139 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF600Q6ZNG1 722 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 ASB13Q8WXK3 278 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 PDCD10Q9BUL8 212 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 UFSP2Q9NUQ7 469 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 COA4Q9NYJ1 87 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 A0A1B0GWJ7 208 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 RAB19A4D1S5 217 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 C1QTNF9BB2RNN3 333 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 SLC33A1O00400 549 aaPredicted RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 CD8AP01732 235 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 CTSDP07339 412 aaPredicted RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 C1QTNF9P0C862 333 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF728P0DKX0 622 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 CEBPDP49716 269 aaPredicted RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 FGL1Q08830 312 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 HERPUD1Q15011 391 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 ZNF146Q15072 292 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 POC1AQ8NBT0 407 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 TSNAXQ99598 290 aaKnown RBP7.96□□□□□ -1.14
LINC00838-201ENST00000562956 TLNRD1Q9H1K6 362 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 HES4Q9HCC6 221 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 TUBD1Q9UJT1 453 aa7.96□□□□□ -1.14
LINC00838-201ENST00000562956 A6NLC8 198 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 TRDCB7Z8K6 153 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 ADAP1O75689 374 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 RCC1P18754 421 aaPredicted RBP7.95□□□□□ -1.14
LINC00838-201ENST00000562956 PVALBP20472 110 aaPredicted RBP7.95□□□□□ -1.14
LINC00838-201ENST00000562956 AADACP22760 399 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 RAB13P51153 203 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 ATXN7L3Q14CW9 347 aaPredicted RBP7.95□□□□□ -1.14
LINC00838-201ENST00000562956 GUCA2BQ16661 112 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 WDR82Q6UXN9 313 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 RBMS3Q6XE24 437 aaKnown RBP7.95□□□□□ -1.14
LINC00838-201ENST00000562956 OR2Z1Q8NG97 314 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 MOB3AQ96BX8 217 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 SYT3Q9BQG1 590 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 JKAMPQ9P055 326 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 IGKV1-6A0A0C4DH72 117 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 C13orf42A0A1B0GVH6 325 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 C16orf97H3BN30 126 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 ACAA1P09110 424 aaPredicted RBP7.95□□□□□ -1.14
LINC00838-201ENST00000562956 SPP1P10451 314 aa7.95□□□□□ -1.14
LINC00838-201ENST00000562956 GLRXP35754 106 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms