RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RNF144BQ7Z419 303 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OSR2Q8N2R0 312 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SPICQ8N5J4 248 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF525Q8N782 197 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CHST4Q8NCG5 386 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OR4D6Q8NGJ1 314 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 OR5D18Q8NGL1 313 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 NDNFQ8TB73 568 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 DYNC2LI1Q8TCX1 351 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 EMG1Q92979 244 aaKnown RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SLAMF9Q96A28 289 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 RFT1Q96AA3 541 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SDSLQ96GA7 329 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 MED30Q96HR3 178 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CMTM3Q96MX0 182 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 PIMREGQ9BSJ6 248 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 RNF167Q9H6Y7 350 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ELL3Q9HB65 397 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 SPACA1Q9HBV2 294 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CCDC59Q9P031 241 aaKnown RBP4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ABRACLQ9P1F3 81 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 NLKQ9UBE8 527 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 KAAG1Q9UBP8 84 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 DAPK2Q9UIK4 370 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 ING4Q9UNL4 249 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 WIPI2Q9Y4P8 454 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 CACNG2Q9Y698 323 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 A3GALT2U3KPV4 340 aa4.77□□□□□ -1.65
SCAF11-213ENST00000550629 IGKV1D-17A0A075B6S4 117 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 A0A0A6YYH2 397 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 METTL21EPA6NDL7 271 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 CCDC160A6NGH7 325 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 NKX6-3A6NJ46 265 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 A6NJ64 397 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM14DPA8MWL7 114 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 F8VVB4 439 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 F8VWA3 439 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 LYNX1G3V0Z9 82 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 SH2D1BO14796 132 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TNFRSF13BO14836 293 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 WNT9BO14905 357 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 CRTAPO75718 401 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 SFTPBP07988 381 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 LYNX1P0DP58 116 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 MGMTP16455 207 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 PRKACAP17612 351 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 EGR1P18146 543 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 BCL3P20749 454 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 PRDX2P32119 198 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 NPBWR2P48146 333 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RBM11P57052 281 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RPS27AP62979 156 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 PAX5Q02548 391 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 MXD1Q05195 221 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 SPCS2Q15005 226 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 P2RY14Q15391 338 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RBMS2Q15434 407 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 CLEC12BQ2HXU8 276 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 MPV17LQ2QL34 196 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 C2orf76Q3KRA6 126 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 ARFGEF3Q5TH69 2177 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RAB12Q6IQ22 244 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 SLC36A1Q7Z2H8 476 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TGIF2LYQ8IUE0 185 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF561Q8N587 486 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 FAM89BQ8N5H3 189 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RNF152Q8N8N0 203 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 NRACQ8N912 160 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM104Q8NE00 496 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 OR51D1Q8NGF3 324 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 ANGPTL6Q8NI99 470 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF488Q96MN9 340 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 GAL3ST1Q99999 423 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 NUDT16L1Q9BRJ7 211 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 URM1Q9BTM9 101 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TM2D1Q9BX74 207 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM59Q9BXS4 323 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 BARHL1Q9BZE3 327 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 FAM234AQ9H0X4 552 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 WDR13Q9H1Z4 485 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 TMEM165Q9HC07 324 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RBFOX1Q9NWB1 397 aaKnown RBP4.76□□□□□ -1.65
SCAF11-213ENST00000550629 MIOXQ9UGB7 285 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 ZNF222Q9UK12 451 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 RAB22AQ9UL26 194 aa4.76□□□□□ -1.65
SCAF11-213ENST00000550629 DSCAMO60469 2012 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 TANC2Q9HCD6 1990 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 A0A075B6Q4 140 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 F5H0A9 414 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-213ENST00000550629 DEGS1O15121 323 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 SIGLEC5O15389 551 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 CA11O75493 328 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 TPPPO94811 219 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 HAND1O96004 215 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 APOA1P02647 267 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 CSN2P05814 226 aa4.75□□□□□ -1.65
SCAF11-213ENST00000550629 WNT2P09544 360 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms