RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ABCA4P78363 2273 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 NEURL1O76050 574 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 GLAP06280 429 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 RBMXL1Q96E39 390 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 EDARQ9UNE0 448 aa11.74□□□□□ -0.53
PRPF40B-209ENST00000548825 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF14P17017 642 aaPredicted RBP11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 MPZP25189 248 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 MEOX1P50221 254 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 CDIPTO14735 213 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 SRSF4Q08170 494 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 C20orf204Q6ZNR8 217 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 CMTM1Q8IZ96 169 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 HPSE2Q8WWQ2 592 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM173AQ9BQD7 235 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 OR1A1Q9P1Q5 309 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 MMP24Q9Y5R2 645 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 CUL9Q8IWT3 2517 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 OTOGLQ3ZCN5 2332 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 FGF16O43320 207 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 TXNL1O43396 289 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 CHST1O43916 411 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 FOXO1Q12778 655 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 AWAT1Q58HT5 328 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 RTL6Q6ICC9 239 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 OR2C3Q8N628 320 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 RFESDQ8TAC1 157 aa11.73□□□□□ -0.53
PRPF40B-209ENST00000548825 AGFG2O95081 481 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 TRA2AQ13595 282 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 WDR5BQ86VZ2 330 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 TAAR9Q96RI9 348 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 ZFP57Q9NU63 452 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 INTS1Q8N201 2190 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 TRBV6-7A0A0A0MS04 114 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 WISP2O76076 250 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 UQCC3Q6UW78 93 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF826PQ6ZT77 177 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 NUDT16L1Q9BRJ7 211 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 OBP2BQ9NPH6 170 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 ARFGEF3Q5TH69 2177 aa11.72□□□□□ -0.53
PRPF40B-209ENST00000548825 ZFP92A6NM28 416 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 DEFB108AA8MXU0 73 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 DEGS1O15121 323 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 NXPH2O95156 264 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 BMP5P22003 454 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 FABP6P51161 128 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 FGF8P55075 233 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 ELLP55199 621 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 CCL20P78556 96 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 THNSL2Q86YJ6 484 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 SUMF2Q8NBJ7 301 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 OR5T1Q8NG75 326 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 FGF23Q9GZV9 251 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 FAM86C1Q9NVL1 165 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF727A8MUV8 499 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 CYTIPO60759 359 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 PSG2P11465 335 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 SULT1A2P50226 295 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 DYNLT3P51808 116 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 NAAAQ02083 359 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 CLEC12BQ2HXU8 276 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 AVPI1Q5T686 147 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 C12orf57Q99622 126 aa11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 ZNF703Q9H7S9 590 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-209ENST00000548825 IGHV3-43A0A0B4J1X8 118 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 IGLV3-1P01715 115 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 MMP7P09237 267 aaPredicted RBP11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 METTL15P1P0C7V9 234 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 IGHV3-43DP0DP04 118 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 SLC10A1Q14973 349 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 VHLLQ6RSH7 139 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 MDP1Q86V88 176 aa11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 MSI2Q96DH6 328 aaKnown RBP11.71□□□□□ -0.54
PRPF40B-209ENST00000548825 A0A1W2PNU3 283 aaPredicted RBP11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 IGSF23A1L1A6 192 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 TAAR5O14804 337 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 YKT6O15498 198 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 MT-CO3P00414 261 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 LHX2P50458 406 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 HIST1H3AP68431 136 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 HIST2H3PS2Q5TEC6 136 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 HES3Q5TGS1 186 aa11.7□□□□□ -0.54
PRPF40B-209ENST00000548825 GPR157Q5UAW9 335 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms