RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SMIM4Q8WVI0 70 aa14.09□□□□□ -0.15
CADM1-220ENST00000546000 TRIM63Q969Q1 353 aa14.09□□□□□ -0.15
CADM1-220ENST00000546000 WDR12Q9GZL7 423 aaKnown RBP14.09□□□□□ -0.15
CADM1-220ENST00000546000 FAM234AQ9H0X4 552 aa14.09□□□□□ -0.15
CADM1-220ENST00000546000 KLK11Q9UBX7 282 aa14.09□□□□□ -0.15
CADM1-220ENST00000546000 ABCA2Q9BZC7 2435 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 ODAMA1E959 279 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 KIAA1324LA8MWY0 1029 aaPredicted RBP14.08□□□□□ -0.16
CADM1-220ENST00000546000 FAM157AC9JC47 383 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 RNF223E7ERA6 249 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 GABARAPH6UMI1 98 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 CTDSPLO15194 276 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 LPLP06858 475 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 ZFP36P26651 326 aaKnown RBP14.08□□□□□ -0.16
CADM1-220ENST00000546000 PITPNAQ00169 270 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 ZNF273Q14593 569 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 SLC35E4Q6ICL7 350 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 OR52W1Q6IF63 320 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 NLRC3Q7RTR2 1065 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 Q8N402 240 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 MRGPRDQ8TDS7 321 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 SNAPC3Q92966 411 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 ST6GALNAC5Q9BVH7 336 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 LPAR2Q9HBW0 351 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 CLN8Q9UBY8 286 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 ITGB1BP2Q9UKP3 347 aa14.08□□□□□ -0.16
CADM1-220ENST00000546000 GSTZ1O43708 216 aaPredicted RBP14.07□□□□□ -0.16
CADM1-220ENST00000546000 CA11O75493 328 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 SLC25A16P16260 332 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 KCNJ3P48549 501 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 GNB2P62879 340 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 LCN2P80188 198 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 MRPS15P82914 257 aaKnown RBP14.07□□□□□ -0.16
CADM1-220ENST00000546000 BTN2A1Q7KYR7 527 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 FAM185AQ8N0U4 392 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 GAPTQ8N292 157 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 SSBP3Q9BWW4 388 aaPredicted RBP14.07□□□□□ -0.16
CADM1-220ENST00000546000 IFT46Q9NQC8 304 aa14.07□□□□□ -0.16
CADM1-220ENST00000546000 PRRC2AP48634 2157 aaKnown RBP14.07□□□□□ -0.16
CADM1-220ENST00000546000 H3BUI4 141 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 CCL3L1P16619 93 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 USF1P22415 310 aaPredicted RBP14.06□□□□□ -0.16
CADM1-220ENST00000546000 PTBP1P26599 531 aaKnown RBP eCLIP14.06□□□□□ -0.16
CADM1-220ENST00000546000 SSTR5P35346 364 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 GDNFP39905 211 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 ARL6IP1Q15041 203 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 ESCO2Q56NI9 601 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 FAM53AQ6NSI3 398 aaPredicted RBP14.06□□□□□ -0.16
CADM1-220ENST00000546000 ZNF880Q6PDB4 577 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 OR5D13Q8NGL4 314 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 FCAMRQ8WWV6 532 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 FOXC2Q99958 501 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 SCPEP1Q9HB40 452 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 Q9N2K0 584 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 TRAPPC2LQ9UL33 140 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 ANAPC10Q9UM13 185 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 C2CD3Q4AC94 2353 aa14.06□□□□□ -0.16
CADM1-220ENST00000546000 LINC00854A0A1B0GVQ3 168 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 A0A1W2PQ09 198 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 TPPPO94811 219 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 IL7P13232 177 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 DTYMKP23919 212 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 PPP5CP53041 499 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 ERVFRD-1P60508 538 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 RPL31P62899 125 aaKnown RBP14.05□□□□□ -0.16
CADM1-220ENST00000546000 IFITM3Q01628 133 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 GDPD1Q8N9F7 314 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 RAB39BQ96DA2 213 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 OCSTAMPQ9BR26 566 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 THAP7Q9BT49 309 aaPredicted RBP14.05□□□□□ -0.16
CADM1-220ENST00000546000 ABCB10Q9NRK6 738 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 MTFP1Q9UDX5 166 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 MALRD1Q5VYJ5 2156 aa14.05□□□□□ -0.16
CADM1-220ENST00000546000 CCDC168Q8NDH2 2452 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 ARHGAP32A7KAX9 2087 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 TRBV6-6A0A0A6YYG2 114 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 C12orf77C9JDV5 145 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 SULT1C2O00338 296 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 ORC5O43913 435 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 HLA-DMAP28067 261 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 RCVRNP35243 200 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 DLX1P56177 255 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 HLA-DRB3P79483 266 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 MRPS10P82664 201 aaKnown RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 PAX5Q02548 391 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 LTC4SQ16873 150 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 TMEM200BQ69YZ2 307 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 FAAP20Q6NZ36 180 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 PRSS57Q6UWY2 283 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 HOGA1Q86XE5 327 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 CIARTQ8N365 385 aaPredicted RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 PRR18Q8N4B5 295 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 OR1L1Q8NH94 360 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 REG4Q9BYZ8 158 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 MBNL3Q9NUK0 354 aaKnown RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 RABL2AQ9UBK7 228 aaPredicted RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 RABL2BQ9UNT1 228 aa14.04□□□□□ -0.16
CADM1-220ENST00000546000 RBMX2Q9Y388 322 aaKnown RBP14.04□□□□□ -0.16
CADM1-220ENST00000546000 CR1P17927 2039 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms