RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GLIPR1P48060 266 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 NPY4RP50391 375 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 DLX6P56179 175 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 LCN2P80188 198 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 GRK1Q15835 563 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ATAD3CQ5T2N8 411 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 FIP1L1Q6UN15 594 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 ZNF497Q6ZNH5 498 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 BTN2A1Q7KYR7 527 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 C5orf24Q7Z6I8 188 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 SAMD12Q8N8I0 201 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 DTX3Q8N9I9 347 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 TMEM185AQ8NFB2 350 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 OR10R2Q8NGX6 335 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ACOT12Q8WYK0 555 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ST6GAL2Q96JF0 529 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 WDFY2Q96P53 400 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 SMR3AQ99954 134 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 SOSTQ9BQB4 213 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 URM1Q9BTM9 101 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 FAAP24Q9BTP7 215 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 PECRQ9BY49 303 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 CLN8Q9UBY8 286 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 RPUSD1Q9UJJ7 312 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 HSF4Q9ULV5 492 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 PCDHB10Q9UN67 800 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 MEX3AA1L020 520 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 MGST3O14880 152 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 SHOXO15266 292 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 NAPSAO96009 420 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 HLA-DQB1P01920 261 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 MT-ND4P03905 459 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 PTHLHP12272 177 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 GNB3P16520 340 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 HLA-DMAP28067 261 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ERP29P30040 261 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 P2RX3P56373 397 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 GNB2P62879 340 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 AESQ08117 197 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ZNF273Q14593 569 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ATXN7L3Q14CW9 347 aaPredicted RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 CR1LQ2VPA4 569 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ZNF260Q3ZCT1 412 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ZFP69Q49AA0 526 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ESCO2Q56NI9 601 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 PAN3Q58A45 887 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 LRRC10Q5BKY1 277 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 UBE2NLQ5JXB2 153 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 SPANXN2Q5MJ10 180 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 TMEM200BQ69YZ2 307 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 NLRC3Q7RTR2 1065 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 LAX1Q8IWV1 398 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 IQCF2Q8IXL9 164 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 OR4M1Q8NGD0 313 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 OR56B1Q8NGI3 324 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 MRPL30Q8TCC3 161 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 RAB39BQ96DA2 213 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 CMTM3Q96MX0 182 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 NUDT16L1Q9BRJ7 211 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 HDHD3Q9BSH5 251 aaPredicted RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 ATG5Q9H1Y0 275 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 ZMAT3Q9HA38 289 aaKnown RBP8.8□□□□□ -1
NPIPB3-210ENST00000542817 LPAR2Q9HBW0 351 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.8□□□□□ -1
NPIPB3-210ENST00000542817 GLS2Q9UI32 602 aa8.8□□□□□ -1
NPIPB3-210ENST00000542817 KIAA2026Q5HYC2 2103 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 FN1P02751 2386 aaKnown RBP8.79□□□□□ -1
NPIPB3-210ENST00000542817 LOC105371242A0A075B767 164 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 TRAV39A0A0B4J263 110 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 PPIAL4CA0A0B4J2A2 164 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 KIR2DS1A0A191URI9 304 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 ODAMA1E959 279 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 UBE2QL1A1L167 161 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 GPR37O15354 613 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 XRCC3O43542 346 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 SSX5O60225 188 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 AVPP01185 164 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 MSMBP08118 114 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 MELTFP08582 738 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 SPNP16150 400 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 HIST1H1DP16402 221 aaKnown RBP8.79□□□□□ -1
NPIPB3-210ENST00000542817 NDUFB7P17568 137 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 KCNJ3P48549 501 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 ERVFRD-1P60508 538 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 PAX8Q06710 450 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 C17orf58Q2M2W7 97 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 SMUG1Q53HV7 270 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 UTF1Q5T230 341 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 SLC35E4Q6ICL7 350 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 ZNF880Q6PDB4 577 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
NPIPB3-210ENST00000542817 Q6ZTK2 550 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 ZNF767PQ75MW2 155 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 NOXA1Q86UR1 476 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 IZUMO1Q8IYV9 350 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 Q8N7P7 452 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 LINC01356Q8N9X3 169 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 OR5D13Q8NGL4 314 aa8.79□□□□□ -1
NPIPB3-210ENST00000542817 RAB40AQ8WXH6 277 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms