RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 LILRB1Q8NHL6 650 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PSMF1Q92530 271 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PIGCQ92535 297 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 GTF3AQ92664 365 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 EXTL1Q92935 676 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 CPNE4Q96A23 557 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 CLCC1Q96S66 551 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SH3BGRL3Q9H299 93 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PARPBPQ9NWS1 579 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 P4HTMQ9NXG6 502 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 DLL3Q9NYJ7 618 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 GVINP1Q7Z2Y8 2422 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 RTTNQ86VV8 2226 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TNRC6AQ8NDV7 1962 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TRBV6-6A0A0A6YYG2 114 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 IGSF23A1L1A6 192 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 UMAD1C9J7I0 102 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PITX3O75364 302 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 C1QL1O75973 258 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SERPINA7P05543 415 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 WNT2P09544 360 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PF4V1P10720 104 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF44P15621 663 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 BCL3P20749 454 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 UCP1P25874 307 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MEOX2P50222 304 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 RAB5BP61020 215 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 FGF12P61328 243 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 S100A12P80511 92 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 GNMTQ14749 295 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 HERPUD1Q15011 391 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PDCD1Q15116 288 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 RNPS1Q15287 305 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 RHEBQ15382 184 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MPV17LQ2QL34 196 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 AWAT1Q58HT5 328 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 NMSQ5H8A3 153 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ACER2Q5QJU3 275 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC25A26Q70HW3 274 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 DPPA2Q7Z7J5 298 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TBC1D26Q86UD7 250 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ODF3L1Q8IXM7 274 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 OR2C3Q8N628 320 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SUMF1Q8NBK3 374 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PLPPR1Q8TBJ4 325 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ABHD3Q8WU67 409 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 IL22RA2Q969J5 263 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 MALSU1Q96EH3 234 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 C14orf79Q96F83 325 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF845Q96IR2 970 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 YPEL4Q96NS1 127 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SIGLEC12Q96PQ1 595 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 C12orf57Q99622 126 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SPIN2AQ99865 258 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SPIN2BQ9BPZ2 258 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PARP12Q9H0J9 701 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC35B3Q9H1N7 401 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF442Q9H7R0 627 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 PLEKHF2Q9H8W4 249 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SPACA1Q9HBV2 294 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC7A10Q9NS82 523 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 LYRM2Q9NU23 88 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 TCFL5Q9UL49 500 aa4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 EP300Q09472 2414 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-212ENST00000542495 LAMA1P25391 3075 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SDK1Q7Z5N4 2213 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 IGKV1-6A0A0C4DH72 117 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 MED19A0JLT2 244 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 BTBD17A6NE02 478 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 FAM24AA6NFZ4 105 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SLC22A20A6NK97 555 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF724A8MTY0 619 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 C1orf196B1AJZ1 125 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF732B4DXR9 585 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 UBE2CO00762 179 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 OR7C1O76099 320 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CER1O95813 267 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 TK1P04183 234 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CFIP05156 583 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ACAA1P09110 424 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CTXN2P0C2S0 81 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 GLI4P10075 376 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CEACAM1P13688 526 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 HOXB4P17483 251 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 PPP1CCP36873 323 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 NKX2-1P43699 371 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 NOVA1P51513 510 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 AKR1D1P51857 326 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 B2MP61769 119 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 RPS18P62269 152 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 RAB1AP62820 205 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ARF1P84077 181 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF616Q08AN1 781 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 PRDX4Q13162 271 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ZNF266Q14584 549 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 SSPNQ14714 243 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 ODF1Q14990 250 aa4.44□□□□□ -1.7
ATPAF1-212ENST00000542495 CEACAM21Q3KPI0 293 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms