RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 SYNGR1O43759 233 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 ZNF728P0DKX0 622 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 PRDX4Q13162 271 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 UBALD1Q8TB05 177 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
DDX55-209ENST00000542286 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 DNAJB11Q9UBS4 358 aa12.69□□□□□ -0.38
DDX55-209ENST00000542286 M0R296 226 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 CST4P01036 141 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 AADACP22760 399 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 RAB1AP62820 205 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 IL15RAQ13261 267 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 OR8B8Q15620 311 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 GUK1Q16774 197 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 HES3Q5TGS1 186 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 OR52M1Q8NGK5 317 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 OR1J1Q8NGS3 322 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 CD300LFQ8TDQ1 290 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 ERGIC1Q969X5 290 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 PRDM13Q9H4Q3 707 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 GAR1Q9NY12 217 aaKnown RBP12.68□□□□□ -0.38
DDX55-209ENST00000542286 RFNGQ9Y644 331 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 UMAD1C9J7I0 102 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 H7C1Q1 480 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 MT-CO3P00414 261 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 HKR1P10072 659 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 SELEP16581 610 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 BTF3P20290 206 aaKnown RBP12.68□□□□□ -0.38
DDX55-209ENST00000542286 SNCAP37840 140 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 RPS10P46783 165 aaKnown RBP12.68□□□□□ -0.38
DDX55-209ENST00000542286 MEOX1P50221 254 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 FUT6P51993 359 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 NDUFA6P56556 154 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 RBM11P57052 281 aaKnown RBP12.68□□□□□ -0.38
DDX55-209ENST00000542286 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 ABCA11PQ4W5N1 156 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 MIDNQ504T8 468 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 MYPOPQ86VE0 399 aaPredicted RBP12.68□□□□□ -0.38
DDX55-209ENST00000542286 C1QL4Q86Z23 238 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 IL22RA1Q8N6P7 574 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 SCGB3A2Q96PL1 93 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 GFOD1Q9NXC2 390 aa12.68□□□□□ -0.38
DDX55-209ENST00000542286 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 ICE1Q9Y2F5 2266 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 ARGFXA6NJG6 315 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 S100PBPQ96BU1 408 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 C10orf35Q96D05 121 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 C1QTNF5Q9BXJ0 243 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 BCO1Q9HAY6 547 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 SLC2A9Q9NRM0 540 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 NECAP2Q9NVZ3 263 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 CXorf65A6NEN9 183 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 SCTP09683 121 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 PET100P0DJ07 73 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 NDUFB7P17568 137 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 PCBD1P61457 104 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 C1orf123Q9NWV4 160 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 MTCH1Q9NZJ7 389 aa12.67□□□□□ -0.38
DDX55-209ENST00000542286 A0A1B0GV50 99 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 ZNF732B4DXR9 585 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 NME2P1O60361 137 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
DDX55-209ENST00000542286 RHEBQ15382 184 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 NEK7Q8TDX7 302 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 TP53RKQ96S44 253 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 SCRT1Q9BWW7 348 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 FBXL17Q9UF56 701 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 PHF1O43189 567 aaPredicted RBP12.66□□□□□ -0.38
DDX55-209ENST00000542286 TNFSF12O43508 249 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 PDCD6O75340 191 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 OR2C1O95371 312 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 SYNGR4O95473 234 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 ZNF616Q08AN1 781 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 MALLQ13021 153 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 TMEM164Q5U3C3 297 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 HEPN1Q6WQI6 88 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 MRPL21Q7Z2W9 205 aaKnown RBP12.66□□□□□ -0.38
DDX55-209ENST00000542286 GCNT2Q8N0V5 402 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 OR10D4PQ8NGN7 298 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 EXTL1Q92935 676 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 CNTNAP3Q9BZ76 1288 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 DOK5Q9P104 306 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 ARHGAP21Q5T5U3 1957 aa12.66□□□□□ -0.38
DDX55-209ENST00000542286 HS3ST1O14792 307 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 SLC31A2O15432 143 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
DDX55-209ENST00000542286 CELA3BP08861 270 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 HIST1H1BP16401 226 aaKnown RBP12.65□□□□□ -0.38
DDX55-209ENST00000542286 RPL12P30050 165 aaKnown RBP12.65□□□□□ -0.38
DDX55-209ENST00000542286 ZNF100Q8IYN0 542 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 APH1AQ96BI3 265 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 JTBO76095 146 aa12.65□□□□□ -0.38
DDX55-209ENST00000542286 FHITP49789 147 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms