RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 HTR2CP28335 458 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 CD34P28906 385 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 APLNRP35414 380 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 CBX5P45973 191 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 CSNK1A1P48729 337 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 CX3CR1P49238 355 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 HCCSP53701 268 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 H2BFSP57053 126 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 CTXN1P60606 82 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 B2MP61769 119 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 BLOC1S1P78537 153 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DEFA5Q01523 94 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TAF13Q15543 124 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 HMGN3Q15651 99 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 GUCA2BQ16661 112 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 ALG10Q5BKT4 473 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM255AQ5JRV8 349 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TEX30Q5JUR7 227 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 VAX1Q5SQQ9 334 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 C10orf91Q5T1B1 145 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM244Q5VVB8 128 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 MBNL2Q5VZF2 373 aaKnown RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DHRS7BQ6IAN0 325 aaPredicted RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 HAGHLQ6PII5 290 aaPredicted RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DEGS2Q6QHC5 323 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DRAM2Q6UX65 266 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 NHLRC1Q6VVB1 395 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 Q6YL49 198 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 IL34Q6ZMJ4 242 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 SLC25A42Q86VD7 318 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 C1QL4Q86Z23 238 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF679Q8IYX0 411 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 NKAIN3Q8N8D7 197 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM185AQ8NFB2 350 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 OR1M1Q8NGA1 313 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 OR51S1Q8NGJ8 323 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 OR1J1Q8NGS3 322 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 OR2G2Q8NGZ5 317 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 LINC01006Q8NI28 216 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 FGFBP3Q8TAT2 258 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 STOML3Q8TAV4 291 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 FAM110DQ8TAY7 271 aaPredicted RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DYRK2Q92630 601 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 ARL11Q969Q4 196 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 PPP1R14AQ96A00 147 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM106AQ96A25 262 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 MEGF10Q96KG7 1140 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 INTS14Q96SY0 518 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 NMNAT3Q96T66 252 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TSNAXQ99598 290 aaKnown RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 SEC11CQ9BY50 192 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 NMES1Q9C002 83 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 ATG5Q9H1Y0 275 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM106BQ9NUM4 274 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 SHPKQ9UHJ6 478 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 MRM2Q9UI43 246 aaKnown RBP4.98□□□□□ -1.61
CPSF7-219ENST00000539952 IKZF2Q9UKS7 526 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 RAB22AQ9UL26 194 aa4.98□□□□□ -1.61
CPSF7-219ENST00000539952 DOCK11Q5JSL3 2073 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 TVP23AA6NH52 213 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 OR2AT4A6NND4 320 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF736B4DX44 427 aaPredicted RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 IFNL4K9M1U5 179 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 LGALS8O00214 317 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 XKRYO14609 159 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 DOK2O60496 412 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 RPP14O95059 124 aaKnown RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 OR6A2O95222 327 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 SPDEFO95238 335 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 MT-ATP6P00846 226 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 CD3DP04234 171 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 AMY2AP04746 511 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 S100A8P05109 93 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ISG15P05161 165 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 CHRM2P08172 466 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 PET100P0DJ07 73 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 IGHV4-38-2P0DP08 117 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 CCL2P13500 99 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 HLA-DOBP13765 273 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 TUBG1P23258 451 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 TNFSF4P23510 183 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 PSMB6P28072 239 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 CRABP1P29762 137 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 MDH2P40926 338 aaKnown RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 CDKN2AP42771 156 aaKnown RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 POU3F4P49335 361 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 PRKXP51817 358 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 RIDAP52758 137 aaKnown RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 LOXL3P58215 753 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
CPSF7-219ENST00000539952 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ERVS71-1P61550 626 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ERVK-25P63136 954 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ROM1Q03395 351 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ARL6IP1Q15041 203 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF74Q16587 644 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 C2orf68Q2NKX9 166 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 DEFB112Q30KQ8 113 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 BEAN1Q3B7T3 259 aa4.97□□□□□ -1.61
CPSF7-219ENST00000539952 ACTBL2Q562R1 376 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms