RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 E9PI62 339 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TMEM11P17152 192 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RAB7AP51149 207 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GBX2P52951 348 aaPredicted RBP15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 KRTAP10-11P60412 298 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 DEFB121Q5J5C9 76 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ZNF329Q86UD4 541 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 SATL1Q86VE3 508 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 DRAM1Q8N682 238 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LINC00482Q8N8I6 264 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 HAVCR2Q8TDQ0 301 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MRGPRDQ8TDS7 321 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TNFAIP8L1Q8WVP5 186 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ZNF649Q9BS31 505 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GPR61Q9BZJ8 451 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 AMBNQ9NP70 447 aa15.6■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LOC100130705A0A1B0GUX0 176 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 A0A1W2PPI3 338 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 NPIPB11E5RHQ5 1161 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GABRPO00591 440 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 KCNJ3P48549 501 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PAX5Q02548 391 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RAB40BQ12829 278 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RSU1Q15404 277 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LTC4SQ16873 150 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 VAX1Q5SQQ9 334 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RSBN1Q5VWQ0 802 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 SLC16A12Q6ZSM3 486 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 C5orf56Q8N8D9 126 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 OR10A7Q8NGE5 316 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RFESDQ8TAC1 157 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PLPPR1Q8TBJ4 325 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CHPT1Q8WUD6 406 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM192AQ9GZU8 254 aa15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 SMPD3Q9NY59 655 aaPredicted RBP15.59■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FGF16O43320 207 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GNG10P50151 68 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RPL23AP62750 156 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 EGFEM1PQ0D2K5 195 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 DIAPH2-AS1Q14236 149 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 HNF4GQ14541 408 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 PIGYQ3MUY2 71 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZNF529Q6P280 563 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 MRPL41Q8IXM3 137 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR8H3Q8N146 312 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 Q8NFD4 153 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR51A2Q8NGJ7 313 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR10K1Q8NGX5 313 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RHOXF1Q8NHV9 184 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 DPF1Q92782 380 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 JAM3Q9BX67 310 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 FAM118AQ9NWS6 357 aa15.58■□□□□ 0.08
TNFRSF1B-204ENST00000536782 WI2-2373I1.2A0A1W2PRP0 233 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SERPINE3A8MV23 424 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 HTR3BO95264 441 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 HOXD3P31249 432 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SSTR5P35346 364 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SOX2P48431 317 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ASCL4Q6XD76 172 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ETV3LQ6ZN32 361 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 PACRGLQ8N7B6 248 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR52I1Q8NGK6 324 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR10X1Q8NGY0 326 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 NOL4LQ96MY1 436 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 DPCDQ9BVM2 203 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TAS2R4Q9NYW5 299 aa15.57■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IGKV1D-33P01593 117 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IGKV1-33P01594 117 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CD2P06729 351 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 THBS3P49746 956 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GTF2A1P52655 376 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SLC35B1P78383 322 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GABPB1Q06547 395 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RCN1Q15293 331 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 KLHL22Q53GT1 634 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR2W3Q7Z3T1 314 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SUMF2Q8NBJ7 301 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZNF555Q8NEP9 628 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 MCRIP2Q9BUT9 160 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ZFP57Q9NU63 452 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 ST3GAL6Q9Y274 331 aa15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RPL36Q9Y3U8 105 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1B-204ENST00000536782 TRAV39A0A0B4J263 110 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 A0A1W2PPE3 182 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 NUDT19A8MXV4 375 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 HSD17B6O14756 317 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GZMHP20718 246 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SLC6A1P30531 599 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 SLC35E3Q7Z769 313 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 FOXRED2Q8IWF2 684 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 COMMD1Q8N668 190 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GPR148Q8TDV2 347 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 RGP1Q92546 391 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 MRPS18AQ9NVS2 196 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 LINC00527Q9UJ94 153 aa15.55■□□□□ 0.08
TNFRSF1B-204ENST00000536782 OR7C1O76099 320 aaPredicted RBP15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CDRT1O95170 752 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 IGHG2P01859 326 aa15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 CSTBP04080 98 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1B-204ENST00000536782 GAPDHP04406 335 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms