RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AGPAT2O15120 278 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 CELA3BP08861 270 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 SPP1P10451 314 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 IL32P24001 234 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 NPBWR1P48145 328 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 F2RL1P55085 397 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 PMP22Q01453 160 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 ZNF880Q6PDB4 577 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 SPAG16Q8N0X2 631 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 FAM58AQ8N1B3 248 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 ZNF565Q8N9K5 539 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 RDH5Q92781 318 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 PKIBQ9C010 78 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 SPACA1Q9HBV2 294 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 URB1O60287 2271 aaKnown RBP14.97□□□□□ -0.01
USH1C-205ENST00000527020 ATP6V1G2-DDX39BF2Z307 99 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 HSD17B6O14756 317 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 SEC11BP0C7V7 166 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 BOD1Q96IK1 185 aa14.97□□□□□ -0.01
USH1C-205ENST00000527020 H2AFB1P0C5Y9 115 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 DANCRP0C864 163 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 ZNF14P17017 642 aaPredicted RBP14.96□□□□□ -0.01
USH1C-205ENST00000527020 CTRB1P17538 263 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 UCP1P25874 307 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 CTRB2Q6GPI1 263 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 WDR86Q86TI4 376 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 CBLN2Q8IUK8 224 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 ZNF695Q8IW36 515 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 NANOS1Q8WY41 292 aaKnown RBP14.96□□□□□ -0.01
USH1C-205ENST00000527020 SH3BGRL3Q9H299 93 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 RIMS4Q9H426 269 aaPredicted RBP14.96□□□□□ -0.01
USH1C-205ENST00000527020 DLL3Q9NYJ7 618 aa14.96□□□□□ -0.01
USH1C-205ENST00000527020 BORCS7-ASMTA0A0B4J1R7 106 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 SLC34A2O95436 690 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 CTXN2P0C2S0 81 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 EWSR1Q01844 656 aaKnown RBP eCLIP14.95□□□□□ -0.02
USH1C-205ENST00000527020 NMSQ5H8A3 153 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 DHRS7BQ6IAN0 325 aaPredicted RBP14.95□□□□□ -0.02
USH1C-205ENST00000527020 Q6P435 159 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 FAM122CQ6P4D5 195 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 SUMF1Q8NBK3 374 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 IFT22Q9H7X7 185 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 FAM212BQ9NTI7 297 aaPredicted RBP14.95□□□□□ -0.02
USH1C-205ENST00000527020 ZNF175Q9Y473 711 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 J3QT63 122 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 ADAM20O43506 726 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 SFTA3P0C7M3 94 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 CD80P33681 288 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 SOX8P57073 446 aa14.95□□□□□ -0.02
USH1C-205ENST00000527020 POLR2GP62487 172 aaKnown RBP eCLIP14.95□□□□□ -0.02
USH1C-205ENST00000527020 ZNF324BQ6AW86 544 aaPredicted RBP14.95□□□□□ -0.02
USH1C-205ENST00000527020 A0A1W2PR80 420 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 IGSF23A1L1A6 192 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 CLEC18AA5D8T8 446 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 FAM24AA6NFZ4 105 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 NKX2-1P43699 371 aaPredicted RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 FHITP49789 147 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 ASCL1P50553 236 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 TNFSF10P50591 281 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 SRSF6Q13247 344 aaKnown RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 GNMTQ14749 295 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 TRIP6Q15654 476 aaKnown RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 CXorf66Q5JRM2 361 aaPredicted RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 OR2C3Q8N628 320 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 TMEM178AQ8NBL3 297 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 CLEC18CQ8NCF0 446 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 PLPPR1Q8TBJ4 325 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 SCRT1Q9BWW7 348 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 SMPD2O60906 423 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 PGLYRP1O75594 196 aaPredicted RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 SNAPINO95295 136 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 IGHV1-2P23083 117 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 ERVS71-1P61550 626 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 HLA-DRB3P79483 266 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 SWI5Q1ZZU3 235 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 TBC1D28Q2M2D7 210 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 FAM76BQ5HYJ3 339 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 ODF3L1Q8IXM7 274 aa14.94□□□□□ -0.02
USH1C-205ENST00000527020 GMPPAQ96IJ6 420 aaPredicted RBP14.94□□□□□ -0.02
USH1C-205ENST00000527020 DUXBA0A1W2PPF3 345 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 TNFSF12O43508 249 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 C1QL1O75973 258 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 WISP2O76076 250 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 LMO1P25800 156 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 DVL1P1P54792 670 aaPredicted RBP14.93□□□□□ -0.02
USH1C-205ENST00000527020 UCP2P55851 309 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 H1FOOQ8IZA3 346 aaPredicted RBP14.93□□□□□ -0.02
USH1C-205ENST00000527020 CABLES2Q9BTV7 478 aa14.93□□□□□ -0.02
USH1C-205ENST00000527020 H0Y980 276 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 HFEQ30201 348 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 MIDNQ504T8 468 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 HSD17B11Q8NBQ5 300 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 OR5D13Q8NGL4 314 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 KIRREL1Q96J84 757 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 SPIN2AQ99865 258 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 SPIN2BQ9BPZ2 258 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 OR2J1Q9GZK6 312 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 MAGT1Q9H0U3 335 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 CLCF1Q9UBD9 225 aa14.92□□□□□ -0.02
USH1C-205ENST00000527020 CACFD1Q9UGQ2 172 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms