RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 A0A1W2PPE3 182 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 NPIPB11E5RHQ5 1161 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 K7EIL1 84 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 CDRT1O95170 752 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 IL1AP01583 271 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 LIMS3P0CW19 117 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 LIMS4P0CW20 117 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 KRTAP10-11P60412 298 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 SLC35A2P78381 396 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 KLHL22Q53GT1 634 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 RSBN1Q5VWQ0 802 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 ZNF529Q6P280 563 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 ASCL4Q6XD76 172 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 Q8NFD4 153 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 HAVCR2Q8TDQ0 301 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 APH1BQ8WW43 257 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 RGP1Q92546 391 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 NOL4LQ96MY1 436 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 C9orf16Q9BUW7 83 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 JAM3Q9BX67 310 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 LINC00527Q9UJ94 153 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 ST3GAL6Q9Y274 331 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 MOB4Q9Y3A3 225 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 RPL36Q9Y3U8 105 aaKnown RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 AMMECR1Q9Y4X0 333 aaPredicted RBP10.53□□□□□ -0.72
CPSF4-210ENST00000469897 HSPE1-MOB4S4R3N1 261 aa10.53□□□□□ -0.72
CPSF4-210ENST00000469897 A0A1W2PPI3 338 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 TMEM11P17152 192 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 HOXD3P31249 432 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-210ENST00000469897 SSTR5P35346 364 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 MADCAM1Q13477 382 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 IL13RA2Q14627 380 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 SMN1Q16637 294 aaKnown RBP10.52□□□□□ -0.73
CPSF4-210ENST00000469897 XAF1Q6GPH4 301 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 GPR148Q8TDV2 347 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 ORAI1Q96D31 301 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 RCC1LQ96I51 464 aaKnown RBP10.52□□□□□ -0.73
CPSF4-210ENST00000469897 DPCDQ9BVM2 203 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-210ENST00000469897 PCDHB16Q9NRJ7 776 aa10.52□□□□□ -0.73
CPSF4-210ENST00000469897 WI2-2373I1.2A0A1W2PRP0 233 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 CLIC3O95833 236 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 GZMHP20718 246 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 REG1BP48304 166 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 ETV1P50549 477 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 RAB7AP51149 207 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 FAM53AQ6NSI3 398 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 RPL22L1Q6P5R6 122 aaKnown RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 SLC16A12Q6ZSM3 486 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 MOB3BQ86TA1 216 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 C10orf67Q8IYJ2 551 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 C5orf56Q8N8D9 126 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 LINC00482Q8N8I6 264 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 OR10A7Q8NGE5 316 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 OR10X1Q8NGY0 326 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 OR52N1Q8NH53 320 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 UBALD1Q8TB05 177 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 CPNE2Q96FN4 548 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 METTL9Q9H1A3 318 aa10.51□□□□□ -0.73
CPSF4-210ENST00000469897 FGF20Q9NP95 211 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-210ENST00000469897 GEMIN2O14893 280 aaKnown RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 OR7C1O76099 320 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 DUS4LO95620 317 aaKnown RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 CSTBP04080 98 aaKnown RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 GAPDHP04406 335 aaKnown RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 CD2P06729 351 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 ZNF93P35789 620 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-210ENST00000469897 KCNJ3P48549 501 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 OR2G6Q5TZ20 316 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 CHPT1Q8WUD6 406 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 TMEM106AQ96A25 262 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 S100A13Q99584 98 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 S100A14Q9HCY8 104 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 TMEM138Q9NPI0 162 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 BABAM2Q9NXR7 383 aa10.5□□□□□ -0.73
CPSF4-210ENST00000469897 IGHV3-72A0A0B4J1Y9 119 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 NCBP2LA6PVI3 153 aaKnown RBP10.49□□□□□ -0.73
CPSF4-210ENST00000469897 C15orf65H3BRN8 121 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 CCRL2O00421 344 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 FGF16O43320 207 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 WBP4O75554 376 aaKnown RBP10.49□□□□□ -0.73
CPSF4-210ENST00000469897 SERPINA2P20848 420 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 BDKRB2P30411 391 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 THBS3P49746 956 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 RPL23AP62750 156 aaKnown RBP10.49□□□□□ -0.73
CPSF4-210ENST00000469897 PAX5Q02548 391 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 CCDC58Q4VC31 144 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 ATAD3CQ5T2N8 411 aa10.49□□□□□ -0.73
CPSF4-210ENST00000469897 DDI2Q5TDH0 399 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms