RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CENPXA8MT69 81 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 IFNL4K9M1U5 179 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 GLAP06280 429 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 CD3GP09693 182 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 IRF2P14316 349 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 FUT3P21217 361 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 GLRA1P23415 457 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 CHATP28329 748 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 RCVRNP35243 200 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
SF3A3-203ENST00000461869 TMEM50BP56557 158 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 IL13RA1P78552 427 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 IKZF1Q13422 519 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 ARFRP1Q13795 201 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 ZNF146Q15072 292 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 MPPED2Q15777 294 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 PLAC9Q5JTB6 97 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 NKAPLQ5M9Q1 402 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 MZT2BQ6NZ67 158 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 C11orf53Q8IXP5 236 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 BCL6BQ8N143 479 aaPredicted RBP12.88□□□□□ -0.35
SF3A3-203ENST00000461869 Q8TCH9 128 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 LRRC29Q8WV35 223 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 ST8SIA4Q92187 359 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 ZNF488Q96MN9 340 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 AUP1Q9Y679 476 aa12.88□□□□□ -0.35
SF3A3-203ENST00000461869 LRRC30A6NM36 301 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 POM121CA8CG34 1229 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 SRRM5B3KS81 715 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 KNG1P01042 644 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 DYRK1AQ13627 763 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 MIDNQ504T8 468 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 ZNF826PQ6ZT77 177 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 MOGAT3Q86VF5 341 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 SEH1LQ96EE3 360 aa12.87□□□□□ -0.35
SF3A3-203ENST00000461869 RCC2Q9P258 522 aaKnown RBP12.87□□□□□ -0.35
SF3A3-203ENST00000461869 IGHV3-64DA0A0J9YX35 117 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 MEIOCA2RUB1 952 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 NAP1L6A6NFF2 107 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 F8VVB4 439 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 F8VWA3 439 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 SH2D1BO14796 132 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 ORC5O43913 435 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
SF3A3-203ENST00000461869 PTHLHP12272 177 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 SNU13P55769 128 aaKnown RBP12.86□□□□□ -0.35
SF3A3-203ENST00000461869 RBM39Q14498 530 aaKnown RBP12.86□□□□□ -0.35
SF3A3-203ENST00000461869 TRIM16LQ309B1 348 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 KLF17Q5JT82 389 aaPredicted RBP12.86□□□□□ -0.35
SF3A3-203ENST00000461869 ATAD3CQ5T2N8 411 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 SIGIRRQ6IA17 410 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 C6orf201Q7Z4U5 140 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 TRAPPC6BQ86SZ2 158 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 C1orf87Q8N0U7 546 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 ZNF48Q96MX3 618 aaPredicted RBP12.86□□□□□ -0.35
SF3A3-203ENST00000461869 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 RNF7Q9UBF6 113 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 TBC1D24Q9ULP9 559 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 PPP1R3CQ9UQK1 317 aa12.86□□□□□ -0.35
SF3A3-203ENST00000461869 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 MCRIP1C9JLW8 97 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 LYRM1O43325 122 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 LANCL1O43813 399 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 ZNF44P15621 663 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 TBPP20226 339 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 DTYMKP23919 212 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 TAS2R19P59542 299 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-203ENST00000461869 SPICQ8N5J4 248 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 NUDCD2Q8WVJ2 157 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 CMSS1Q9BQ75 279 aaKnown RBP12.85□□□□□ -0.35
SF3A3-203ENST00000461869 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-203ENST00000461869 CHST6Q9GZX3 395 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 SEBOXQ9HB31 216 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-203ENST00000461869 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 TMEM106BQ9NUM4 274 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 DCAF16Q9NXF7 216 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 DNAJB11Q9UBS4 358 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 KLK11Q9UBX7 282 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 KCNK7Q9Y2U2 307 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
SF3A3-203ENST00000461869 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 ARHGAP32A7KAX9 2087 aa12.85□□□□□ -0.35
SF3A3-203ENST00000461869 CLDN34H7C241 214 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 DEGS1O15121 323 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 HAND1O96004 215 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 RBMXP38159 391 aaKnown RBP12.84□□□□□ -0.35
SF3A3-203ENST00000461869 MDH2P40926 338 aaKnown RBP12.84□□□□□ -0.35
SF3A3-203ENST00000461869 SEC61A1P61619 476 aaKnown RBP12.84□□□□□ -0.35
SF3A3-203ENST00000461869 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 ACTBL2Q562R1 376 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
SF3A3-203ENST00000461869 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms